Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01201 ATGAATGGCGAAGGTAGACGAAGAGATCGCAAAGATTCGCGATATATCAGGAAACCGAAGTTCATTCGAACTGCTGAAGAAGAACTCGAATCCAAGCTAGGGTTTGATCTGTTCTCCGAAGGGGAAAAGAGGCTTGGATGGTTGCTTACCTTTTCTTCTTCATCGTGGGAGGATCGAGAACGCAACAAGGTCTATAGTTGCGTGGATCTCTATTTTGTTTCTCAGGATGGGTCTTCTTTCAAATCCAAGTACAAGTTCCCTCCTTACTTCTATGCCGCCACAAAGGATAAAATGGAATGGGATGTCGAGGCGTATCTAAAACGACGGTACGAAGGGCAAATTGCGGACATAAAAATTGTGGAGAAAGAGGACCTCGATCTAAAAAATCATTTGTCAGGCTTACATAAATCTTATTTAAAGATATCCTTCGACACTGTCCAACAATTAATGCACGTGAAAAATGATCTACTGCGTGTTGTTGAAAGAAACCAGGCAAAGATTGATGCTGCGGAAGCATATGAATCCATACTAAGTGGGAAAAGCAAGCAAAGACCTCAAGATTTTATAGATTGTATAGTTGATCTCCGAGAGTACGACGTTCCTTATCATGTTCGCTTTGCGATTGATAATGATGTAAGATGCGGGCAGTGGTACGATGTTACCGTATCTAGTAGTGGTGTTATCCTAGAGAGGAGGACTGATCTTCTACAGCGTGCTGAAGTTCATGTTTGTGCATTTGATATTGAGACCACAAAACTTCCTTTGAAATTTCCAGATGCTGAATATGATTTGATAATGATGATTTCATACATGGTGGATGGACAAGGGTACCTGATAATTAACAGAGAGTGTGTAGGGGAAGATATAGCAGATTTGGAGTACACTCCAAAACCAGAATTTGAAGGGTATTTCAAAGTGGAAAATATGAAAAATGAGGAAGAGCTCCTTAGACAGTGGTTTGCCCATATGCGAGAGGTGAAGCCTGGTATTTATGTCACCTACAATGGTGATTTCTTTGATTGGCCATTCCTCGAAAGTAGAGCAGCCTTTCATGGAATTAAAATGAGTGATGAGGTAGGATTTCAATGTGACAAGAATCAGGGGGAATGCCGTGCTAAATTTTCTTGCCATCTGGATTGTTTTGCTTGGGTCAAACGTGATAGTTATCTCCCTCAAGGCAGCCAGGGTCTAAAGGCTGTTACAAAGGCCAAGTTGGGTTATGATCCATTGGAGGTGAATCCTGAGGATATGGTTCGGTTTGCCATGGAACAACCCCAGACGATGGCTTCTTATTCTGTATCAGATGCTGTTGCAACGTACTATCTGTACATGACATATGTTCATCCGTTCATTTTCTCTCTTGCAACTATCATACCTATGCCACCTGATGAGGTTTTGCGCAAGGGAAGCGGTACCCTTTGTGAAATGCTTCTTATGGTCCAGGCATACAAGGCAAATGTTATCTGTCCTAATAAGCACCAAGCTGATACGGAGAAGTTTTTTAATAACCACCTTCTGGAAAGTGAGACATATATAGGTGGCCATGTGGAATGCCTTGAAAGTGGTGTTTTCAGATCTGATCTTCCCACTAAGTTTCAGCTTCATCCATCTGCCTATGAGCAATTAATCGGTAACCTCGATCGTGATCTGCAATATGCTATAAGAGTAGAGGGTAAAATGGACATGGAATCGGTCTCAAATTATGATGAAGTGAAGAATGCTATCATGGAAAAGCTTGTGAGGTTGCGAGATGAACCTACACGCGAGGAATGCCCTCTTATATATCATCTGGATGTTGCTGCAATGTATCCAAATATTATTTTAACAAACAGGCTTCAGCCACCATCAATAGTCTCAGATGAGGTCTGCACTGCATGTGATTTCAATCGTCCAGGGAAAACTTGTCTCCGAAGGCTTGAATGGGTTTGGCGTGGAGAGACATTCACGGCAAAGAAAAGTGACTATTATCACCTGAAGAGGCAAATTGAGTCTGAGCTAGTTGATAGTGTAGATGGTCAGTTTTCAAAATCTTTTCTTGACCTTCCAAAAATGGAGCAACAATTGAAGCTGAAAGAGCGTCTAAAGAAGTATTGCCAAAAGGCATATAAAAGGGTCCTTGACAAACCAGTCACCGAACTTCGAGAAGCAGGGATATGCATGCGGGAAAATCCTTTCTATGTTGATACTGTTCGCAGTTTCCGGGATAGAAGGTATGAATATAAAGGACTTAACAAGGTCTGGAAGGGGAAATTAGGAGATGCAAAGGCCAGTGGAAACTCTATAAAGATTCAGGAAGCGCAAGATATGGTAGTCCTCTATGATTCTTTACAGCTTGCTCATAAATGTATACTTAATTCGTTCTACGGATATGTCATGCGCAAGGGTGCGAGATGGTATTCGATGGAAATGGCTGGAGTAGTCACTTATACTGGAGCAAAAATCATTCAGAATGCTCGTTTACTGGTTGAAAAAATTGGGAGACCACTGGAGTTGGATACAGATGGCATCTGGTGTGCACTTCCTGGATCGTTTCCTGAGAACTTTACCTTCAAAACAAAAGACTTGAAGAGAAAGCTGACAATCTCCTATCCTTGTGTTATGCTTAATGTTGATGTGGCAAGAAACAATACGAATGATCAATACCAGACACTCAAAGATCCTGTTAGTAAGACGTATACAATGCATAGTGAATGCTCCATCGAGTTTGAAGTGGATGGACCATATAAGGCAATGATTCTCCCAGCTTCAAAAGAAGAAGGTATTTTAATTAAGAAGCGGTATGCCGTTTTTAATGATGATGGAACCCTTGCTGAGCTTAAAGGTTTTGAGATCAAGCGTAGAGGTGAGCTGAAGCTCATCAAAGTTTTCCAGGCTGAGGTTTTTGACAAGTTCCTCCACGGAACGACCTTGGAGGAATGCTATTCAGCAGTTGCATCTGTTGCGAATTGCTGGCTCGATCTTCTCGATAATCAAGGAATTGACATCGCTGACAGTGAGTTGCTTGACTACATATCTGAATCAAGCACAATGAGTAAATCCTTAGTAGATTATGGAGAGCAGAAGTCATGTGCTGTGACCACTGCAAGGCGACTTGCTGATTTTCTTGGTGATACCATGGTTAAAGACAAAGGACTACGTTGCCAGTATATAGTTGCACGCGAACCACAGGGCACACCAGTAAGCGAGCGTGCTATTCCTGTTGCAATATTTGAGACTGATGCTGAAATTGTGAAGTTCTATGTGCGGAAATGGTGCAAGATTTCATCAGACGTGGGCATTCGATCTATTGTTGATTGGTCCTATTACAAGCAACGACTTAGTTCAGCAATTCAGAAAATTATTACCATTCCTGCAGCAATGCAGAAGGTTGCTAATCCTGTCCCTAGAGTAATTCATCCTGATTGGCTGCATAAGAAGGTCCGTGAGAAGGAGGACAAATTTCGCCAGCGAAAATTAGTTGATATTTTCAGCCCATTGAACAAAGATGATGCCATGCAAAGAAACTCCCCTGCCGTTGCCTCCAATCATGTGTCGAATGCAGTAAATGTTGAAGATTTAGAAGACTTCAGAAACAATAATAGTGCTTCTATAATTGGACCTCGACCTATGGTTCGTAGCTATGAAGTTAACAAAGATAGGCATTCAGCCAAGACATCTTATCCTATGGTTTCCCTGCAACAACAAACTGATGCTACTCGCAGACAGAGTCGGCCACTTATGCCATTGCATCAAGATGCTATCTCCACTGAAAATATTGACAGAAACATTGATTATCAGGGATGGCTTGAAGTAAAGAAGAGAAAATGGAAAGATACGCTAGAGGAAAGGAAGAGGCGCAGGTTAGGTGGTTCGAAGAGGTTACGTCAATCCGATGGTGTCTCTGAGTTTCCTGGTGCTGTTACAAGTCATAAACAAGATCAAGGTCGAAGTGGGTTTAGTTCATTTTTCAGGAGAAATGAGTTAGCCCTTGTGCGCTCATATTGGCAGATAATACAGGTCGTACCAAGTTCACAACTTGGGCAATTTTTTGCTTGGGTTGTTGTGGAAGGAATCATGCTTAAGGTTCCCATAAATGTTCCCAGAGTGTTTTACCTCAACTCTAAAGCACCCATTACAGAAGAATTTCCTGGAAAGCGTGTCAGCAAGACTCTTCCACACGGCCGTCCTAGCTTTAATCTCATTGAGGTGATAATTGCTGAAGATCAATTTAGGGTGGAGAGAAAAAAACTTGCAGCTCATCTTGCAGATCCAGAAGTTGAGGGGATATATGAGACAAAGGTGCCGCTAGAGTTTAATGCTATCCTCCAAATTGGCTGTGTTTGTAAAGTGGACAGAACAAGTAAAAATCGGAATTCCCAAGACGGATGGAGTCTGAGTGAACTACATATGAAGACAACAACAGAATGCTCTTATCTAGAACAGCCTGTCTCTTTCTTTTACTTGTATCATAGCTTGTCCGAGGGACGAGGGATATATGTTGCATATTTTCCTGCATCTGGCACAGTATTTGTCGTGGTGGTTAATACTTTCCAGAACAAAGAATTATCCCCATCTATTCTTGAAAAACAATTCCGTGAAGCTTGCCAAGCATTGTCTGTTGAGCCTCCTTCTCCTGGAAATGGAATTATTTTCAAGGTGGAATATGTCGGATATGTCAGAGATGCTGAAAAACTTCTGCAACGAACAATAAATGAGTACAGATCTCAACATCATGGACCTGCAATTGGCGTCATTGAATGCCCAAACATTCATTCAATGAAGTCAGGTGTACGTGTTCTGGATGACTTCCCGTGTGTCAACATTCCTTGCAATGCTCGTGATAGCCAATATCAGGCCATTGGGTGGCAAATTGTGGCTGCAAAAATTGGAATGCAACGGTGTGCTGCATCATCGCAGTGGTTGAGTGAGAGAATTTCTCTTTCAAGATATGCCCATGTACCCTTGGGGAATTTTGAGCTTGATTGGCTTTTATTTACAGCAGATATCTTCTTTTCTAGAGCATTGCGTGATCAGCAACAGGTACTTTGGATATCGGATGATGGCATTCCAGATCTAGGTGGTGTTGGTGAAGAAGATACATGCTTTGCCGATGAAGTCCATCAACCTGTTCTTACTTATCCTGGGGCATATAGAAAAGTGACTGTGGAGCTAAAGATCCATCATCTGGCTGTAGACGCTCTTCTGAAGAGCAACCAAGTGAACGAAATGGAAGGAGGAGCACTATTTGGATTTTACCAGGACATGAATTCTGGAGCACATGAACAGACTGGCTTTGATGAGGCTAGCACATGTGCATCCGCATTTCATGTCCTGAAACAATTGATTCAAAGATGCCTTCAAGATGCAATCAAATTTGGAAATATATTTGCTGATGCGATACTGCAACATCTCTATCGATGGCTGTGCAGTCCACAATCAAAACTTCATGACCCATCTCTTCACCGCGTTCTACACAAGGTCATGCAAAAGGTGTTTGCACTATTGCTGGCTGAGTTTCGCAAATTGGGTGCCACAATCATCTTCGCTGACTTCTCGAAGGTTATCATAGACACAGGAAAGTCAGATTTGTCCGCAGCTCAAGCTTACTGTGACTGTTTACTAAAAACTCTGCAAACCAGAGATCTTTTTGAGTGGATTGAGATTGAACCACTGCACTTCTGGCATTCCTTGCTATTTATGGATCAGTACAACTACGGTGGGATTCAGGCTAGAGTCCATGGTGGATGTTCTGGAGATCTTTCAAAGCCACCTAATGATGGTATAGATGATGAACCTCAAGTGGACATTGTGTCGAGCTGGAATATAGCTGAATACTTACCAAAGGAGACTCAGGATCACTTTGTTTTGATTGTCTCTGAATTTATGTACCTTCCATGGAAATATGCACAACAAGATGAAATTGGAGCATCTTTGAGGGATGGAAACTTGTGCACTCCATCAATCACTGCTGCAGCTGCTGAGACTTTTGAATCACGTGTGACGGAATTTCTTAAAGAGCAGATCAGCTCTCACTTCACAGACAAACTTCTTAGGATTGTTCGTGAGACGGTTCTCCATAAGAAGGGAATGAAAAAATCTGGGAATGATGTACATGCATCTCATGGATTCCCACGGGTAGCTGGTTCTAATATGCAAATGGGGGACACTGCCCTGGAGTTCATTAAGCATGTCTGTGCTGTTCTTGCTCTCGACCATAATGTTCAACATGATATTCTGGTGATGAGGAAGAATCTGTTAAAATATGTTCGTGTGAGGGAGTTTGATCCAGAAGCAGAGTTTCATGATCCCTACCTGTCCTTCACCCTACCAAATGTGATTTGCAGTTACTGCAATGATTGCAGAGACTTAGATTTGTGCCGCGACTCAACTTTACTGGCCCACGAGTGGCGCTGTGCTGTGCCTCACTGTGGGCAGCCCTACAATCGTGAGGTGATGGAAAATGCTCTTCTTCAAATAGTCCGGCAGAGAGAACGCCTCTACCATCTACAGGACCTGGTGTGTCTCAAGTGCAACCAGGTTAAAGCTGCCCATTTAGCCGAGCAATGCACATGTGCTGGCTCTTTCAGGTGCAAGGAAGATGTGTCTGAATTCCGCAGCAAAATGCAAGTTTTCTTGAACATAGCCAACCATCAGAAATATCAACTTCTCCAAGAGTGTACCTCGTGGATTCTGGAATTCTGA 6681 0.4246 MNGEGRRRDRKDSRYIRKPKFIRTAEEELESKLGFDLFSEGEKRLGWLLTFSSSSWEDRERNKVYSCVDLYFVSQDGSSFKSKYKFPPYFYAATKDKMEWDVEAYLKRRYEGQIADIKIVEKEDLDLKNHLSGLHKSYLKISFDTVQQLMHVKNDLLRVVERNQAKIDAAEAYESILSGKSKQRPQDFIDCIVDLREYDVPYHVRFAIDNDVRCGQWYDVTVSSSGVILERRTDLLQRAEVHVCAFDIETTKLPLKFPDAEYDLIMMISYMVDGQGYLIINRECVGEDIADLEYTPKPEFEGYFKVENMKNEEELLRQWFAHMREVKPGIYVTYNGDFFDWPFLESRAAFHGIKMSDEVGFQCDKNQGECRAKFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAMEQPQTMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQADTEKFFNNHLLESETYIGGHVECLESGVFRSDLPTKFQLHPSAYEQLIGNLDRDLQYAIRVEGKMDMESVSNYDEVKNAIMEKLVRLRDEPTREECPLIYHLDVAAMYPNIILTNRLQPPSIVSDEVCTACDFNRPGKTCLRRLEWVWRGETFTAKKSDYYHLKRQIESELVDSVDGQFSKSFLDLPKMEQQLKLKERLKKYCQKAYKRVLDKPVTELREAGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLGDAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGRPLELDTDGIWCALPGSFPENFTFKTKDLKRKLTISYPCVMLNVDVARNNTNDQYQTLKDPVSKTYTMHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAEVFDKFLHGTTLEECYSAVASVANCWLDLLDNQGIDIADSELLDYISESSTMSKSLVDYGEQKSCAVTTARRLADFLGDTMVKDKGLRCQYIVAREPQGTPVSERAIPVAIFETDAEIVKFYVRKWCKISSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVIHPDWLHKKVREKEDKFRQRKLVDIFSPLNKDDAMQRNSPAVASNHVSNAVNVEDLEDFRNNNSASIIGPRPMVRSYEVNKDRHSAKTSYPMVSLQQQTDATRRQSRPLMPLHQDAISTENIDRNIDYQGWLEVKKRKWKDTLEERKRRRLGGSKRLRQSDGVSEFPGAVTSHKQDQGRSGFSSFFRRNELALVRSYWQIIQVVPSSQLGQFFAWVVVEGIMLKVPINVPRVFYLNSKAPITEEFPGKRVSKTLPHGRPSFNLIEVIIAEDQFRVERKKLAAHLADPEVEGIYETKVPLEFNAILQIGCVCKVDRTSKNRNSQDGWSLSELHMKTTTECSYLEQPVSFFYLYHSLSEGRGIYVAYFPASGTVFVVVVNTFQNKELSPSILEKQFREACQALSVEPPSPGNGIIFKVEYVGYVRDAEKLLQRTINEYRSQHHGPAIGVIECPNIHSMKSGVRVLDDFPCVNIPCNARDSQYQAIGWQIVAAKIGMQRCAASSQWLSERISLSRYAHVPLGNFELDWLLFTADIFFSRALRDQQQVLWISDDGIPDLGGVGEEDTCFADEVHQPVLTYPGAYRKVTVELKIHHLAVDALLKSNQVNEMEGGALFGFYQDMNSGAHEQTGFDEASTCASAFHVLKQLIQRCLQDAIKFGNIFADAILQHLYRWLCSPQSKLHDPSLHRVLHKVMQKVFALLLAEFRKLGATIIFADFSKVIIDTGKSDLSAAQAYCDCLLKTLQTRDLFEWIEIEPLHFWHSLLFMDQYNYGGIQARVHGGCSGDLSKPPNDGIDDEPQVDIVSSWNIAEYLPKETQDHFVLIVSEFMYLPWKYAQQDEIGASLRDGNLCTPSITAAAAETFESRVTEFLKEQISSHFTDKLLRIVRETVLHKKGMKKSGNDVHASHGFPRVAGSNMQMGDTALEFIKHVCAVLALDHNVQHDILVMRKNLLKYVRVREFDPEAEFHDPYLSFTLPNVICSYCNDCRDLDLCRDSTLLAHEWRCAVPHCGQPYNREVMENALLQIVRQRERLYHLQDLVCLKCNQVKAAHLAEQCTCAGSFRCKEDVSEFRSKMQVFLNIANHQKYQLLQECTSWILEF* 2227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01201 2226 FunFam DNA polymerase epsilon catalytic subunit 941 1125 - -
Eupl05g01201 2226 FunFam DNA polymerase epsilon catalytic subunit 56 227 - -
Eupl05g01201 2226 Pfam Domain of unknown function (DUF1744) 1540 1901 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Eupl05g01201 2226 Gene3D - 242 442 IPR036397 GO:0003676
Eupl05g01201 2226 CDD DNA_polB_epsilon_exo 240 444 - -
Eupl05g01201 2226 Pfam DNA polymerase family B 760 1062 IPR006134 GO:0000166|GO:0003677
Eupl05g01201 2226 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 18 2225 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Eupl05g01201 2226 Gene3D Palm domain of DNA polymerase 752 937 IPR023211 -
Eupl05g01201 2226 Pfam DNA polymerase family B, exonuclease domain 73 400 IPR006133 -
Eupl05g01201 2226 MobiDBLite consensus disorder prediction 1280 1305 - -
Eupl05g01201 2226 FunFam DNA polymerase epsilon catalytic subunit 240 468 - -
Eupl05g01201 2226 SMART polmehr3 239 842 IPR006172 GO:0000166|GO:0003676|GO:0003887
Eupl05g01201 2226 Gene3D - 941 1125 IPR042087 -
Eupl05g01201 2226 Gene3D DNA Polymerase, chain B, domain 1 50 227 - -
Eupl05g01201 2226 MobiDBLite consensus disorder prediction 1217 1235 - -
Eupl05g01201 2226 CDD POLBc_epsilon 503 1122 - -
Eupl05g01201 2226 SUPERFAMILY DNA/RNA polymerases 486 1115 IPR043502 -
Eupl05g01201 2226 SMART DUF1744_2 1519 1901 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Eupl05g01201 2226 MobiDBLite consensus disorder prediction 1214 1235 - -
Eupl05g01201 2226 SUPERFAMILY Ribonuclease H-like 66 467 IPR012337 -
Eupl05g01201 2226 FunFam DNA polymerase epsilon catalytic subunit 757 937 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01201 1 2117 Core DNA Replication Machinery Family AT1G08260 70.992 0.0 3065
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01201 K02324 - nnu:104586917 3868.16