Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01154 ATGGCGGGCCATAGAGTTGGGGAGACTGGTCTATCAGATTCAGGTCCCTCAAATCAACACACACCATATGCAATCCTACATGGGATCACCCCTCCTTCCACCACTTTTATTAATCAACAAGGATCTGCTTTTGATTTCGGGGAGCTGGAAGAAGCTATTGTGCTTCAAGGAGTTAAGATAAGAGAAAATGAAGCCAAAAAAACTTTTTTCACTACACGACCAGCTGCTACTCTGGAGATGTTCCCTTCATGGCCAATAAGATTCCAGCAAACTTCCAAAGGAAGTTCAAAGTCAGGGGAGAGTACTGATTCTGGATCTGCTCAGAATACTCTCTCTTTTAAAGCTGATGCTCAGTTGGAACCCGAATCTCCTATCAGCAAAAAGGCATCATCATATCAGGCTCTTGATCAGAAGAAACAGCAGCATCAACAACTAGTAGAGATGGCAAATGATGACTCCAGAACAGGACCACCACCAAATCAACAACCCAAAACATTAGATAAGAGGAGGGGAGGTGGTTCAACTTCAGATAAACCACTTGATTCAAAGACGTTGAGACGCTTAGCACAGAACAGAGAGGCAGCAAAGAAAAGCCGACTGAGAAAAAAGGCTTACGTACAACAGCTAGAATCTAGTAGGGTAAAGCTTACCCAGCTAGAACAAGAACTTCAAAGAGCAAGATCTCAGGGTCTTTTCTTAGGAGCAGGAGGTGGTGCAGGTGGAAATCTCAGCTCTGGTGCTGCGATTTTCGACATGGAATATGCGAGATGGTTGGACGAGGAGCACAGGCATATGTTGGAGCTCCGGACAGGGTTGCAAGCACACCCATCAGATGGTGAGCTCAGGATAGTAGTGGATGGACATCTTGCACACTATGATGAGATTTTCCGGCTTAAGGCAGTGGCTGCCAAGTCTGACATATTAACGCCTCAATTAGACCCATTAACGGAGCAGCAATTGATGGGCATTTGTAGCCTCCAACAATCCTCACAACAGGCAGAGGAGGCTCTCTCCCAGGGTCTTGAGCAGCTCCACCATTCTCTAGCCGACACCATCGCTAACGGGTCTCTTACAGAAGGGTCACATGTTGAAAACTACATGGGTCAGATGGTCCTAGCCTTGGGCAAGCTCTCAAATCTTGAAGGGTTCGTTCGCCAGGCTGATAATTTGAGACAGCAAACCCTTCATCAGATGCGTCGGATTTTGACGGTTCGACAAGCAGCTCGATTTTTTTTGTTGATTGGGGAGTACTATAACCGATTACGAGCCCTCAGTTCGATCTGGTCATCTCGTCCGCAAGAGAACTTGATCAACGATGATGGCTCATGCCAGACAACCATGGATTTACAAATGGTTCAAGCGTCACATAACCATTTTTCGAGCTACTGA 1389 0.4629 MAGHRVGETGLSDSGPSNQHTPYAILHGITPPSTTFINQQGSAFDFGELEEAIVLQGVKIRENEAKKTFFTTRPAATLEMFPSWPIRFQQTSKGSSKSGESTDSGSAQNTLSFKADAQLEPESPISKKASSYQALDQKKQQHQQLVEMANDDSRTGPPPNQQPKTLDKRRGGGSTSDKPLDSKTLRRLAQNREAAKKSRLRKKAYVQQLESSRVKLTQLEQELQRARSQGLFLGAGGGAGGNLSSGAAIFDMEYARWLDEEHRHMLELRTGLQAHPSDGELRIVVDGHLAHYDEIFRLKAVAAKSDILTPQLDPLTEQQLMGICSLQQSSQQAEEALSQGLEQLHHSLADTIANGSLTEGSHVENYMGQMVLALGKLSNLEGFVRQADNLRQQTLHQMRRILTVRQAARFFLLIGEYYNRLRALSSIWSSRPQENLINDDGSCQTTMDLQMVQASHNHFSSY* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01154 462 FunFam BZIP family transcription factor 182 231 - -
Eupl05g01154 462 ProSiteProfiles DOG1 domain profile. 188 431 IPR025422 GO:0006351|GO:0043565
Eupl05g01154 462 MobiDBLite consensus disorder prediction 170 186 - -
Eupl05g01154 462 MobiDBLite consensus disorder prediction 1 27 - -
Eupl05g01154 462 MobiDBLite consensus disorder prediction 89 108 - -
Eupl05g01154 462 SUPERFAMILY Leucine zipper domain 183 226 IPR046347 GO:0003700|GO:0006355
Eupl05g01154 462 MobiDBLite consensus disorder prediction 119 186 - -
Eupl05g01154 462 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 186 201 IPR004827 GO:0003700|GO:0006355
Eupl05g01154 462 MobiDBLite consensus disorder prediction 124 162 - -
Eupl05g01154 462 Coils Coil 132 152 - -
Eupl05g01154 462 PANTHER TRANSCRIPTION FACTOR TGA9 115 308 - -
Eupl05g01154 462 Coils Coil 202 229 - -
Eupl05g01154 462 Gene3D - 182 231 - -
Eupl05g01154 462 SMART brlzneu 178 256 IPR004827 GO:0003700|GO:0006355
Eupl05g01154 462 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 181 225 IPR004827 GO:0003700|GO:0006355
Eupl05g01154 462 Pfam Seed dormancy control 264 308 IPR025422 GO:0006351|GO:0043565
Eupl05g01154 462 Pfam bZIP transcription factor 183 223 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01154 Eupl-Chr5 33683269 33689920 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01154 148 462 bZIP Transcription Factor Family AT1G08320 63.714 2.98e-148 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Eupl05g01154 DOG1 2.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01154 K14431 - nnu:104588531 645.195