Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl05g01146 | ATGAGTAAGCTTCAGAGTGATGTGTTGAGAGAAGCCATCTCCCAGGTCACTGGAGATGCCAAGGAGAAAAAGCGCAACTTCACCGAAACAATTGAGCTCCAGATTGGGCTCAAGAACTACGACCCTCAGAAGGACAAGCGTTTCAGTGGTTCTGTGAAGCTGCCACATATCCCTCGCCCTAAGATGAAGGTCTGCATGCTTGGTGATGCTCAGCATGTGGAAGAGGCAGAGAAGATAGGGTTGGACTATATGGATGTGGAAGGGCTGAAGAAGCTGAATAAAAATAAGAAATTGGTCAAGAAGCTTGCCAAGAAATACCATGCTTTTCTAGCATCAGAAGCTGTCATTAAGCAGATTCCTCGTCTTCTTGGCCCAGGTCTCAATAAAGCAGGAAAGTTCCCAACTCTGGTGACTCATCAGGAATCGCTAGAGTCGAAAGTTAATGAAACCAAGGCTATGGTGAAGTTCCAACTGAAGAAGGTTCTTTGCATGGGAGTTGCTGTGGGGAATTGCGGAATGGAGGAGAAGCAGATCTTCCAAAACGTGCAACTCAGCGTTAATTTCCTTGTATCCTTGTTGAAGAAGAATTGGCAAAATGTGAGGTGCTTGTACCTGAAGAGTTCGATGGGGAAGCCATACCGTGTCTTTTAA | 651 | 0.4578 | MSKLQSDVLREAISQVTGDAKEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNCGMEEKQIFQNVQLSVNFLVSLLKKNWQNVRCLYLKSSMGKPYRVF* | 217 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl05g01146 | 216 | Gene3D | - | 65 | 154 | IPR016095 | - | |
Eupl05g01146 | 216 | Gene3D | - | 20 | 211 | - | - | |
Eupl05g01146 | 216 | ProSitePatterns | Ribosomal protein L1 signature. | 116 | 135 | IPR023673 | - | |
Eupl05g01146 | 216 | PANTHER | RIBOSOMAL PROTEIN L7AE FAMILY MEMBER | 12 | 210 | - | - | |
Eupl05g01146 | 216 | FunFam | Ribosomal protein | 65 | 154 | - | - | |
Eupl05g01146 | 216 | Pfam | Ribosomal protein L1p/L10e family | 21 | 210 | IPR028364 | - | |
Eupl05g01146 | 216 | PIRSF | RPL1p_RPL1a_RPL10e_RPL1o | 1 | 216 | IPR002143 | GO:0003723|GO:0003735|GO:0006412|GO:0015934 | |
Eupl05g01146 | 216 | CDD | Ribosomal_L1 | 9 | 215 | IPR028364 | - | |
Eupl05g01146 | 216 | SUPERFAMILY | Ribosomal protein L1 | 22 | 216 | IPR023674 | - | |
Eupl05g01146 | 216 | FunFam | Ribosomal protein | 137 | 214 | - | - | |
Eupl05g01146 | 216 | FunFam | Ribosomal protein L10a | 1 | 119 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl05g01146 | Eupl-Chr5 | 33593615 | 33599484 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl05g01146 | 1 | 216 | Cytoplasmic Ribosomal Protein Gene Family | AT1G08360 | 87.963 | 1.88e-129 | 362 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl05g01146 | K02865 | - | mus:103981132 | 400.593 |