Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01135 ATGGCCAAAGCTGCAGCAGCAGAAGTGGAAGAGTTGCCCAGGGCTATTGTGCGCAGGGTGGTGAAGGATAAGCTCTCACAGTCATCCAACGAAGGAGAAATCATTGTTCACAAAGAAGCACTCCTCGCATTCTCCGAGAGTGCCAGAATTTTCATCCATTACCTCTCTGCTACGGCAAATGACATATGTAAGGAATCAAAGAGACAAACTATAAATGCTGATGATGTTTTGAAAGCACTTGAAGAAATTGAATTTCCCGAGTTCATCGGGCCTCTTAAAGCCTCTTTGGATGACTTGAGGCAAAAAAATGCTGGAAAGAAGGCAGTAGCAGCAAAGGCTAAGGAAGCAGATAAGAAAAGGAAGATGGAGGAAGAACCATCAGAACAGAATGGAGATGGCGGGGGTGGAGAAGATGAGAAAGAAGAAGCCAATGAAGATGAAGATGACACTCCTGATAACGGGGATGGAGAAGATGAGAAAGAAGAAGCCAATGAAGATGAAGATCACACTCCTGATAACGGGGATGGAGAAGATGAGAAAGAAGAAGCCAATGAAGATGAAGATCACACTCCTGATAACGACTGA 585 0.4444 MAKAAAAEVEELPRAIVRRVVKDKLSQSSNEGEIIVHKEALLAFSESARIFIHYLSATANDICKESKRQTINADDVLKALEEIEFPEFIGPLKASLDDLRQKNAGKKAVAAKAKEADKKRKMEEEPSEQNGDGGGGEDEKEEANEDEDDTPDNGDGEDEKEEANEDEDHTPDNGDGEDEKEEANEDEDHTPDND* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01135 194 FunFam DNA polymerase epsilon subunit 3 4 149 - -
Eupl05g01135 194 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 11 80 IPR003958 -
Eupl05g01135 194 Coils Coil 96 116 - -
Eupl05g01135 194 SUPERFAMILY Histone-fold 12 131 IPR009072 GO:0046982
Eupl05g01135 194 MobiDBLite consensus disorder prediction 103 137 - -
Eupl05g01135 194 PANTHER DNA POLYMERASE EPSILON SUBUNIT 3 2 149 - -
Eupl05g01135 194 Gene3D Histone, subunit A 3 155 IPR009072 GO:0046982
Eupl05g01135 194 MobiDBLite consensus disorder prediction 138 194 - -
Eupl05g01135 194 MobiDBLite consensus disorder prediction 103 194 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01135 12 112 CCAAT-HAP3 Transcription Factor Family AT4G14540 31.683 4.02e-11 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Eupl05g01135 CBFD_NFYB_HMF 3.9e-10 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01135 K02326 - nnu:104588747 197.978