Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01116 ATGGGTTCAGATTCTTCAGAAGCTTCTCCTCTGCCCAATTGGGCCTCACAGCCATGCATCATGGGCATCGACGAAGCTGGAAGAGGCCCTGTTTTAGGTCCCATGGTCTACGCATGCTTATATTGTGCTCTCTCCTACCAGAAGACTCTTGCTTCCTTGAGCTTTGCAGATTCAAAGACTCTAAAAGAGGAAAAGAGGGAGGAATTATTCGGAAATTTAAAGGTCAATGAGTCGATTGGATGGGCTGTTGATGTTATAGATCCAAGAGAGCTTTCGGCTAAAATGCTTAAGACAACTAAAATAAACCTAAACGAAATATCACATGATTCTGCCATTGGTCTCGTTGCCAGGGTGCTTGACATTGGAGTTCTTCTAACCGAGGTCTACGTGGATACTGTTGGAGACGCAGAGAAGTACAGAATGAAATTGTCAGAAAGATTTCCGAGTGTCAAATTCACGGTTGCGAAGAAAGCTGATAGTCTTTATCCAGTTGTTAGTGGAGCAAGCATAGTCGCAAAGGTGACTAGAGACCGAGCCTTGCGCAACTGGGTGCTTGATGAAACGGCAGAGAACATGCATAGAAACTTTGGATCTGGATATCCTGGAGACCCTGAAACTAAGGCCTGGTTGGAAGATCACAAACACCCGGTATTTGGATTCCCAACGTTGGTCCGCTTCAGTTGGGGTACGTGCAACCCCTTTTTCAAGGACATGGTTGAAGTCTTATGGGAATCTGATAAACTTGATGAAGATGGTTCCCGCGATGGGAGTGGCAAACGCCGCCAACTGAAATTAAGTAGTGTTGGTTTCACTGGATACAAGAGGAAGAGCGAGGAAATTGAATCTAGTGGTAAAGGTCGCTGCAAGTTCTTCCAGACACGCAAACTTGAGCTACTCACTCATTTCTAG 909 0.4543 MGSDSSEASPLPNWASQPCIMGIDEAGRGPVLGPMVYACLYCALSYQKTLASLSFADSKTLKEEKREELFGNLKVNESIGWAVDVIDPRELSAKMLKTTKINLNEISHDSAIGLVARVLDIGVLLTEVYVDTVGDAEKYRMKLSERFPSVKFTVAKKADSLYPVVSGASIVAKVTRDRALRNWVLDETAENMHRNFGSGYPGDPETKAWLEDHKHPVFGFPTLVRFSWGTCNPFFKDMVEVLWESDKLDEDGSRDGSGKRRQLKLSSVGFTGYKRKSEEIESSGKGRCKFFQTRKLELLTHF* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01116 302 Gene3D - 3 190 IPR036397 GO:0003676
Eupl05g01116 302 ProSiteProfiles Ribonuclease (RNase) H type-2 domain profile. 18 240 IPR024567 GO:0004523
Eupl05g01116 302 SUPERFAMILY Ribonuclease H-like 19 236 IPR012337 -
Eupl05g01116 302 Gene3D Ribonuclease hii. Domain 2 191 238 IPR023160 GO:0004523
Eupl05g01116 302 FunFam Ribonuclease 192 239 - -
Eupl05g01116 302 Pfam Ribonuclease HII 21 231 IPR024567 GO:0004523
Eupl05g01116 302 NCBIfam ribonuclease HII 20 232 IPR004649 GO:0004523|GO:0016070
Eupl05g01116 302 PANTHER RIBONUCLEASE H2 SUBUNIT A 5 287 IPR001352 GO:0003723|GO:0004523
Eupl05g01116 302 FunFam Ribonuclease 2 190 - -
Eupl05g01116 302 CDD RNase_HII_eukaryota_like 21 240 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01116 12 302 Core DNA Replication Machinery Family AT2G25100 68.385 1.68e-148 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01116 K10743 - mof:131166371 518.85