Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01106 ATGGTGAATGTTCCGAAGACAAAGAAGACATACTGTAAGAACAAGGAGTGCAAGAAGCACACCTTGCACAAGGTTACCCAATACAAGAAGGGGAAGGACAGCCTTGCTGTCCAAGGGAAGCGTCGTTATGATCGCAAGCAGTCAGGTTATGGAGGACAGACCAAACCCGTCTTCCACAAGAAGGCAAAAACTACGAAGAAGATTGTGCTGAGGTTGCAGTGCCAGAGCTGCAAACATGTCTCTCAGCACCCAATCAAGAGATGCAAGCATTTTGAGATTGGTGGAGACAAGAAGGGGAAAGGAACTTCTCTCTTTTAG 318 0.4686 MVNVPKTKKTYCKNKECKKHTLHKVTQYKKGKDSLAVQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQSCKHVSQHPIKRCKHFEIGGDKKGKGTSLF* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01106 105 MobiDBLite consensus disorder prediction 28 57 - -
Eupl05g01106 105 Pfam Ribosomal protein L44 19 94 IPR000552 GO:0003735|GO:0005840|GO:0006412
Eupl05g01106 105 ProSitePatterns Ribosomal protein L44e signature. 63 74 IPR000552 GO:0003735|GO:0005840|GO:0006412
Eupl05g01106 105 FunFam 60S ribosomal protein L44 1 105 - -
Eupl05g01106 105 PANTHER 60S RIBOSOMAL PROTEIN L36A/L44 1 105 IPR000552 GO:0003735|GO:0005840|GO:0006412
Eupl05g01106 105 SUPERFAMILY Zn-binding ribosomal proteins 2 94 IPR011332 GO:0006412
Eupl05g01106 105 Gene3D - 1 105 - -
Eupl05g01106 105 MobiDBLite consensus disorder prediction 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01106 Eupl-Chr5 33113786 33115850 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01106 1 105 Cytoplasmic Ribosomal Protein Gene Family AT3G23390 95.238 1.19e-69 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01106 K02929 - atr:18432363 216.083