Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01099 ATGGACGACTTCCCCCCAGGTTTTCGTTTCTACCCGACAGAAGATGAGCTGATTTCATTCTATCTTCACAAGAAGCTTGATGGGAAGAGAGAGGACATGAACCGCGTTATTCCTGTTGTAGACATTTATGAGCTTGATCCATGGCAACTCCCAGAGATTTCAGGGAAGCTGTGCCATGGTGACCCTGAGCAATGGTTTTTCTTCACTCCCAGACAAGAGAGAGAAGCCCGGGGAGGAAGGTCGAACCGAACTACAACTTCCGGCTACTGGAAAGCCACAGGCTCTCCTGGTTATGTTTACTCGTCCGATAACCGAGTTATTGGTGTGAAGAAAACCATGGTTTTCTACAAAGGAAAAGCTCCTACAGGAAGAAAAACCAAATGGAAGATGAACGAGTACAAAGCCATTCAAGGAGAAAGTACAACATCGAGTTGTTCGATTCCAAAGTTACGGCATGAATTGAGCCTGTGTCGAGTGTACGTGAAATCGGGATGTTTACGAGCATTCGATCGCCGTCCATCTGAAGCCACGACAAGCGAAATACCAATTCACCAAGTTCAACGAAATGGGGCCGCAACATCCCCTCAGAACCCTCCTATGGTAGAGAAAACAAGCTCTCCTGAATGTTCGTCTACAGGAGACGATGTTCATCCCTCTCTGACTGGAGAATATGGTGACTGGGATATGATCAAGGATCTCCATCCTCTATGGGAATGGGAACAGTTGAATTGGGTCTAA 738 0.4675 MDDFPPGFRFYPTEDELISFYLHKKLDGKREDMNRVIPVVDIYELDPWQLPEISGKLCHGDPEQWFFFTPRQEREARGGRSNRTTTSGYWKATGSPGYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKWKMNEYKAIQGESTTSSCSIPKLRHELSLCRVYVKSGCLRAFDRRPSEATTSEIPIHQVQRNGAATSPQNPPMVEKTSSPECSSTGDDVHPSLTGEYGDWDMIKDLHPLWEWEQLNWV* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01099 245 MobiDBLite consensus disorder prediction 176 217 - -
Eupl05g01099 245 Pfam No apical meristem (NAM) protein 5 134 IPR003441 GO:0003677|GO:0006355
Eupl05g01099 245 SUPERFAMILY NAC domain 3 162 IPR036093 GO:0003677|GO:0006355
Eupl05g01099 245 Gene3D NAC domain 13 165 IPR036093 GO:0003677|GO:0006355
Eupl05g01099 245 ProSiteProfiles NAC domain profile. 4 162 IPR003441 GO:0003677|GO:0006355
Eupl05g01099 245 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 196 - -
Eupl05g01099 245 MobiDBLite consensus disorder prediction 178 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01099 Eupl-Chr5 33023663 33026777 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01099 2 244 NAC Transcription Factor Family AT3G44350 53.629 1.26e-91 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl05g01099 NAM 6.4e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01099 - - nnu:104607634 372.474