Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl05g01099 | ATGGACGACTTCCCCCCAGGTTTTCGTTTCTACCCGACAGAAGATGAGCTGATTTCATTCTATCTTCACAAGAAGCTTGATGGGAAGAGAGAGGACATGAACCGCGTTATTCCTGTTGTAGACATTTATGAGCTTGATCCATGGCAACTCCCAGAGATTTCAGGGAAGCTGTGCCATGGTGACCCTGAGCAATGGTTTTTCTTCACTCCCAGACAAGAGAGAGAAGCCCGGGGAGGAAGGTCGAACCGAACTACAACTTCCGGCTACTGGAAAGCCACAGGCTCTCCTGGTTATGTTTACTCGTCCGATAACCGAGTTATTGGTGTGAAGAAAACCATGGTTTTCTACAAAGGAAAAGCTCCTACAGGAAGAAAAACCAAATGGAAGATGAACGAGTACAAAGCCATTCAAGGAGAAAGTACAACATCGAGTTGTTCGATTCCAAAGTTACGGCATGAATTGAGCCTGTGTCGAGTGTACGTGAAATCGGGATGTTTACGAGCATTCGATCGCCGTCCATCTGAAGCCACGACAAGCGAAATACCAATTCACCAAGTTCAACGAAATGGGGCCGCAACATCCCCTCAGAACCCTCCTATGGTAGAGAAAACAAGCTCTCCTGAATGTTCGTCTACAGGAGACGATGTTCATCCCTCTCTGACTGGAGAATATGGTGACTGGGATATGATCAAGGATCTCCATCCTCTATGGGAATGGGAACAGTTGAATTGGGTCTAA | 738 | 0.4675 | MDDFPPGFRFYPTEDELISFYLHKKLDGKREDMNRVIPVVDIYELDPWQLPEISGKLCHGDPEQWFFFTPRQEREARGGRSNRTTTSGYWKATGSPGYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKWKMNEYKAIQGESTTSSCSIPKLRHELSLCRVYVKSGCLRAFDRRPSEATTSEIPIHQVQRNGAATSPQNPPMVEKTSSPECSSTGDDVHPSLTGEYGDWDMIKDLHPLWEWEQLNWV* | 246 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl05g01099 | 245 | MobiDBLite | consensus disorder prediction | 176 | 217 | - | - | |
Eupl05g01099 | 245 | Pfam | No apical meristem (NAM) protein | 5 | 134 | IPR003441 | GO:0003677|GO:0006355 | |
Eupl05g01099 | 245 | SUPERFAMILY | NAC domain | 3 | 162 | IPR036093 | GO:0003677|GO:0006355 | |
Eupl05g01099 | 245 | Gene3D | NAC domain | 13 | 165 | IPR036093 | GO:0003677|GO:0006355 | |
Eupl05g01099 | 245 | ProSiteProfiles | NAC domain profile. | 4 | 162 | IPR003441 | GO:0003677|GO:0006355 | |
Eupl05g01099 | 245 | PANTHER | PROTEIN CUP-SHAPED COTYLEDON 2-RELATED | 3 | 196 | - | - | |
Eupl05g01099 | 245 | MobiDBLite | consensus disorder prediction | 178 | 217 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl05g01099 | Eupl-Chr5 | 33023663 | 33026777 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl05g01099 | 2 | 244 | NAC Transcription Factor Family | AT3G44350 | 53.629 | 1.26e-91 | 268 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NAC | Eupl05g01099 | NAM | 6.4e-33 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl05g01099 | - | - | nnu:104607634 | 372.474 |