Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01078 ATGGAGTTACAACTCACCGAAAACGGGAACAATAAACGCAGACGATTCACAGACCGGCACGCCAAAGTCGACGGACGTGGCTGCAGAATCAGAATTCCGGCCGCCTGTGCCCCTGGTATCTTCCAGCTGACTCAGGAACTCGGTCTCAGATCGGACGGAGAAACGGTTCAGTGGCTCTTAGAGCAGACCCGTCCCGAACTCGTTTTTCAACGAACTGCTTCATCAAAGACTCAGCCGAGTTTAAACTCGGCTAACGATTCCGCCCCCGATCCCCATCCCATCGCTTTCGCTTACCCAAAGGATAGTGCGAATGGGAAAATTACGGCTTTGGTCCCTGTTGCGAACGGCGGTGGGCCGGCGCCCACCGCCGGTGAGGCTGACACGGAGTCTGAATCCGGTCCGCGGCCCACTGTTCGAGCCACTGTTGTACAAGCCTCAACCGTCTTCTACGACACTCGAGCGACGATAGAAAAGGCAGAGAGGCTGATTGCAGGTGCTGCTACATATGGGTCACAATTAGTTGTGTTTCCTGAGGCATTTGTTGGCGGTTATCCCCGTGTTTCAAACTTTGGTGTTTCAGAGGGAAGCCATTCGATTGAGGGGAATGAGGAGTTTCAGAAGTATCACGCAGCAGCCATTGATGTTCCTGGTCCTGAAGTCGACCGACTTGCAGCAATTGCTGGAAAATATAAAGTCCATCTAGTAATGGGAGTGGTAGAGAGAGACGGATTCACACTGTACTCCTCAGTTCTCTTTTTTAATTCTGAGGGCCAATATCTTGGGAAACACCGCAAGCTCATGCCAACGGCATCAGAACACACAATTTGGCGTTCCGGAGACAAACCAACACCGCCTGTATATGAGACCCCGATTGGAAAGATTGGTGGGCTCGTCTGCTGGGACAATAGAATGCCTCTTTTAAGAACGGAATTGTATGCTAAAGGTGTTGAAATATATTGTGCACCCACCACGGATGCCAGGGATGTATGGCGGGCATCCATGACCCATATTGCCCTTGAGGGTGGATGCTTTGTTCTGTCTGCCAACCAGTTCTGCCAAAGGAAAGATTACCCATTTCCACCGGAATGTGTTTCCAGAGATGCAGACGGAGATGTCTCACCGGATTCAATAGTGTGTGCTGGAGGCAGTGTCATTATTTCACCATCAGGGGCCATTTTGGCGGGACCCAATCACCAAGGGGAGTCCCTCATATCAGCTGATCTAGATCTTGGAGAAATCGCACGAGCAAAGCTTGATTTCAATGGGGTTGGACACTATGTGGGACCTGACTCCCTTAGCCCGATTGCAAAGGAACCTAGTCCTGTTTCGGTAGCACCTGCAGTGAAAATTGAAGATTCTTAG 1362 0.5088 MELQLTENGNNKRRRFTDRHAKVDGRGCRIRIPAACAPGIFQLTQELGLRSDGETVQWLLEQTRPELVFQRTASSKTQPSLNSANDSAPDPHPIAFAYPKDSANGKITALVPVANGGGPAPTAGEADTESESGPRPTVRATVVQASTVFYDTRATIEKAERLIAGAATYGSQLVVFPEAFVGGYPRVSNFGVSEGSHSIEGNEEFQKYHAAAIDVPGPEVDRLAAIAGKYKVHLVMGVVERDGFTLYSSVLFFNSEGQYLGKHRKLMPTASEHTIWRSGDKPTPPVYETPIGKIGGLVCWDNRMPLLRTELYAKGVEIYCAPTTDARDVWRASMTHIALEGGCFVLSANQFCQRKDYPFPPECVSRDADGDVSPDSIVCAGGSVIISPSGAILAGPNHQGESLISADLDLGEIARAKLDFNGVGHYVGPDSLSPIAKEPSPVSVAPAVKIEDS* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01078 453 PANTHER NITRILASE 125 438 IPR044149 GO:0003824
Eupl05g01078 453 CDD nitrilases_CHs 138 433 IPR044149 GO:0003824
Eupl05g01078 453 MobiDBLite consensus disorder prediction 70 87 - -
Eupl05g01078 453 ProSitePatterns Nitrilases / cyanide hydratase signature 1. 170 185 IPR000132 GO:0003824
Eupl05g01078 453 MobiDBLite consensus disorder prediction 70 91 - -
Eupl05g01078 453 FunFam Bifunctional nitrilase/nitrile hydratase NIT4B 127 422 - -
Eupl05g01078 453 Pfam Carbon-nitrogen hydrolase 139 417 IPR003010 GO:0006807
Eupl05g01078 453 SUPERFAMILY Carbon-nitrogen hydrolase 136 434 IPR036526 -
Eupl05g01078 453 Pfam TCP family transcription factor 17 72 IPR017887 -
Eupl05g01078 453 MobiDBLite consensus disorder prediction 113 137 - -
Eupl05g01078 453 ProSiteProfiles TCP domain profile. 16 70 IPR017887 -
Eupl05g01078 453 Gene3D - 128 421 IPR036526 -
Eupl05g01078 453 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 138 410 IPR003010 GO:0006807
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01078 Eupl-Chr5 32718251 32735477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01078 12 68 TCP Transcription Factor Family AT3G27010 63.158 4.54e-18 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Eupl05g01078 CN_hydrolase 1.1e-62 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01078 K13035 - nnu:104589516 614.764