Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01076 ATGGATGTTTCTAAGTTTCCTGGTTTTAGATTTTCTCCAACGGACGAGGAACTCATCTCTTATTATCTGCACCGGAAAATCGAGGGCTTAGAGAAGAGCGTCGAAGTGATTCAGGAGGTTGACATCTGTAATCACGAGCCTTGGGATTTGCCAGACAAATCCATCATTCCGTCGGATCATGAGTGGTTCTTCTTTTCTCCTACCGGCAGGAAATATCCGAATGGCTCGCAAGCTAAGAGGGCTACTGTAATTGGTTTCTGGAAAGCAACTGGGAAAGAGCGTAACATAAAGTCAGGTTCCAATTTGATAGGTACAAAGAGGACGTTGGTGTTTCACATAGGCCGGGCACCAAAAGGGGAGAGAACAGACTGGATAATGCACGAGTATTGTATCAAAGGAAACAATGTCGATAAATGGCAGGATTCTTATGTTATTTGCCGTCTTCGGAAGAAGCTTGATTCTAGTGTGAAGAATGACAGTCCAAACTGCAAGTCAGCGAGTCAAATAGGTTTATCACCGGCAAACGATGATCATCATGCTGCATCCCAAGTTGCTGGTGACATGCAGCAGTTGCAGATAGCATGTGGAGAGGGCATGTCAATGGAAAGCTCCTCAAAGAAGCAAAGTAGTGTTTTAGATTCTCTTTCCATTGATCCGTCTGCCTCTTCCTCTGAATCTGTTCAGAAACAACCTATTGAGATATGTTCTCCCCAGCTCGAGTCCGAAATCAACCAGGAGGATTGTGACGTGAAGTCCGTAGAAGATGATTGGTTTGCTGACATACTGAACGATGATATCGTCAAGCTTGATGACTTCTCACTGTCTGAAACTCCTTCACAGATGCCTCCTTTTCAGGGCACTGCACATAGGAGGATCAGATTGGAATTGCACAGACCAGGACAAAGTCATGCAGCGACATTGGAAGTCGGTGATGGTGGTTCTGTAGTGAAAGTAATCCGGCAAGAGGCCAAGCAACTGATAAAAGGCTCGAAGAGTAACCACAATCGTCGGATGATATTCAAGGAATTTGTTATCATGGCTTTGCTGGTTTTGTTTCTGCTGATGCTTACAGGAACTTGGGGTTTCAAAAGGTTCACATCTATCAAGTCGTAA 1113 0.4456 MDVSKFPGFRFSPTDEELISYYLHRKIEGLEKSVEVIQEVDICNHEPWDLPDKSIIPSDHEWFFFSPTGRKYPNGSQAKRATVIGFWKATGKERNIKSGSNLIGTKRTLVFHIGRAPKGERTDWIMHEYCIKGNNVDKWQDSYVICRLRKKLDSSVKNDSPNCKSASQIGLSPANDDHHAASQVAGDMQQLQIACGEGMSMESSSKKQSSVLDSLSIDPSASSSESVQKQPIEICSPQLESEINQEDCDVKSVEDDWFADILNDDIVKLDDFSLSETPSQMPPFQGTAHRRIRLELHRPGQSHAATLEVGDGGSVVKVIRQEAKQLIKGSKSNHNRRMIFKEFVIMALLVLFLLMLTGTWGFKRFTSIKS* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01076 370 MobiDBLite consensus disorder prediction 158 172 - -
Eupl05g01076 370 Gene3D NAC domain 14 154 IPR036093 GO:0003677|GO:0006355
Eupl05g01076 370 MobiDBLite consensus disorder prediction 155 185 - -
Eupl05g01076 370 SUPERFAMILY NAC domain 5 151 IPR036093 GO:0003677|GO:0006355
Eupl05g01076 370 MobiDBLite consensus disorder prediction 198 231 - -
Eupl05g01076 370 Pfam No apical meristem (NAM) protein 7 130 IPR003441 GO:0003677|GO:0006355
Eupl05g01076 370 ProSiteProfiles NAC domain profile. 5 151 IPR003441 GO:0003677|GO:0006355
Eupl05g01076 370 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01076 Eupl-Chr5 32692747 32697607 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01076 3 153 NAC Transcription Factor Family AT3G44290 68.874 1.48e-74 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl05g01076 NAM 1.9e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01076 - - ming:122087202 330.102