Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01064 ATGTCTCGTTGTCTCCGCAAAATAGTATTTCAAAATAGGAGGAACAATGGAGATTCAACAACCCAACTGTGTTTTCTTCGAAGCCCATCTCTTAGATCCATTTCTAGTTCCACAAATCAACACTCTATAACAGTCTCTTACCTCATAAACTCATGTGGGTTTTCAGAACAAAATGCTATCTCTGCATCCAAACAGCTCCACTTTGAAACCTCACGTAGACCAGACTCAGTCCTCACCCTCTTCAGAAACCATGGTTTCTCCAAAACCCAAATCTCCAAGATCATCGCCAAGCGCCCATTTCTACTCGGAGCCGATCCCGATAAAATTCTTGGACCAAAAATTGAGTTTTTCCGTTCTTTAGGCCTTTCGGGCCCTGATCTTGCAAAGCTCCTCTACAAAGACTCAACTTTCCTGACACGAAGCTTGAAAAACCAAATCATCCCTTCGATTGATTTCCTTAGGAGTATTGTTCACACCGACACAAATGTCGTTGCCACTATCAAACGCACGACGTGGGTTCTTCTACAAGATCCACAGAAAACGTTGGCACCCAATATCGCTGTTTTGCGAGATCATGGTGTGCCTGAAGCCAATATTTCAAAGTTACTATCAACCCAACCTAGTGCGCTTCTGAAAAATGCGGATCGGTTTAATGAGATTGTCAAGGAGATTAATGAAATGGGGTTCAATCCCTTAAAATCTACATTTGTCCTAGCAGTCCATGGATTGACGTCGTTGAGCAAGTCGACCTGGGAAGCAAAATGTGAGGTTTATAGGAGGTGGGGTTGGTCTGAGGATGAAATTCGTATGGCGTTCAGAAGGCAACCTATTTGTATGATGGCATCTGAGAAGAAGATAATGGGCATAATGGATTTCCTTGTGAACAAAATGGGTCATGAGCCATCACTTATTGCCAGATGCCCGTCAGTGCTCTTGCTTAGCTTGGAGAAGAGGATTATTCCGAGATGTTCAGTTATCCAAGTTCTACTCTCGAAGGGTCTGATTGAGAAAAAAATGCACATATCAACGGTATTGACAATGCTTGAGGAGTGCTTCTTGAAGAAGTTTGTGACCAAGTATCAGGAGAATGTTTCTGAACTGTTGAAGGTATACCAAGGGGCAAGGGAAGATGACTTGTCAGGCACTACCCATTAG 1155 0.4312 MSRCLRKIVFQNRRNNGDSTTQLCFLRSPSLRSISSSTNQHSITVSYLINSCGFSEQNAISASKQLHFETSRRPDSVLTLFRNHGFSKTQISKIIAKRPFLLGADPDKILGPKIEFFRSLGLSGPDLAKLLYKDSTFLTRSLKNQIIPSIDFLRSIVHTDTNVVATIKRTTWVLLQDPQKTLAPNIAVLRDHGVPEANISKLLSTQPSALLKNADRFNEIVKEINEMGFNPLKSTFVLAVHGLTSLSKSTWEAKCEVYRRWGWSEDEIRMAFRRQPICMMASEKKIMGIMDFLVNKMGHEPSLIARCPSVLLLSLEKRIIPRCSVIQVLLSKGLIEKKMHISTVLTMLEECFLKKFVTKYQENVSELLKVYQGAREDDLSGTTH* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01064 384 PANTHER CGI-12 PROTEIN-RELATED 40 361 IPR003690 GO:0003690|GO:0006355
Eupl05g01064 384 Gene3D Transcription termination factor 3, mitochondrial 141 370 IPR038538 -
Eupl05g01064 384 Pfam mTERF 78 230 IPR003690 GO:0003690|GO:0006355
Eupl05g01064 384 Pfam mTERF 245 352 IPR003690 GO:0003690|GO:0006355
Eupl05g01064 384 SMART mt_12 128 159 IPR003690 GO:0003690|GO:0006355
Eupl05g01064 384 SMART mt_12 92 123 IPR003690 GO:0003690|GO:0006355
Eupl05g01064 384 SMART mt_12 164 195 IPR003690 GO:0003690|GO:0006355
Eupl05g01064 384 SMART mt_12 269 300 IPR003690 GO:0003690|GO:0006355
Eupl05g01064 384 SMART mt_12 301 335 IPR003690 GO:0003690|GO:0006355
Eupl05g01064 384 SMART mt_12 200 230 IPR003690 GO:0003690|GO:0006355
Eupl05g01064 384 FunFam Mitochondrial transcription termination factor-like 142 364 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Eupl05g01064 mTERF 8.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01064 K15031 - csin:114321650 390.578