Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01060 ATGTCTTCAAACAGGAGAAAGCTCCTCCGAAACACGGTTGTGGTCAACTTAGGTTGCAGTTGCCAAAGGCCGAAGCTTTCCGACATATTTCGGCCAAAACCAAAGAACAAAACTTCCACTTACCGAAAGCCTGACGTTTACCGCTCTTCTTCCAGTTCATGGGACGACTCTAACACCACCTTTGACACGTACTCCGAAGCAGAAGAAGACCCCAAGAGCTCAAAGGCGGTTACAGGGTTCGGTAAAATTGGCGAGAGCGTAGCGGTTGTGAAGGATTCCGACGACCCGTATCTCGATTTTCGGCATTCGATGCTTCAAATGATCTTGGAGAAGGAGATTTACTCGAGAGAAGATCTTCGGGAGCTTCTCCAATGCTTTCTATCGTTGAATTCTCCTTACCACCATGAGGTTATCGTTAGAGCTTTCACGGAGATCTGGAATGGAGTCTTCTCTGTGAAACCGGAGTCGTCGAAATCACGCCGAAAGTCACGTGAGTTCTAG 501 0.479 MSSNRRKLLRNTVVVNLGCSCQRPKLSDIFRPKPKNKTSTYRKPDVYRSSSSSWDDSNTTFDTYSEAEEDPKSSKAVTGFGKIGESVAVVKDSDDPYLDFRHSMLQMILEKEIYSREDLRELLQCFLSLNSPYHHEVIVRAFTEIWNGVFSVKPESSKSRRKSREF* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01060 166 MobiDBLite consensus disorder prediction 28 75 - -
Eupl05g01060 166 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 49 151 IPR038933 GO:0045892
Eupl05g01060 166 MobiDBLite consensus disorder prediction 43 61 - -
Eupl05g01060 166 Pfam Transcriptional repressor, ovate 93 149 IPR006458 -
Eupl05g01060 166 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Eupl05g01060 166 NCBIfam uncharacterized plant-specific domain TIGR01568 87 147 IPR006458 -
Eupl05g01060 166 ProSiteProfiles OVATE domain profile. 89 148 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01060 Eupl-Chr5 32518730 32519598 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Eupl05g01060 Ovate 3.4e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01060 - - vvi:104880159 216.083