Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01051 ATGGTGTTTGCTAAGTTGGTTGGTTGTTCGATTGGAATCGATGAAATGGTTCCTTCAGCTACGAAACAGATGGGGTTTGGGAGAGAAGAGGGGAGCAGGTCGATGTTTGGTTGGGGTTCATCGAGTAGATCGATGATCCCGGTGGAAGATATGGAGAAGGGGACATTGCATGGTTCTTTCGACCTCACTTTAGGAATGGGTAGTATCGGACATGGGAACGGGGTTCAGTTTTCTATACCGCATGAATCATTTTCTGGAGGTGCAGAAGGTGTTAATTTAAATGAGAAAGAAAGGGGGCCGTTGGGGAATTTCGGCTTCAATGGATTCACCATGGTTGGGATTTCTAGTGAGATCAAAGACAGAGCTGTAAATGGAGGGTCTGGTATCTCACATACCCACCAAAAGAAGGGAACCTCTAAGAAAACTAGGCTACTGAAAGGGGATCCCGAATGGTTGCCTGAGCAGAGGAGTTGTATTCGTTCACCAGGTGTACAAAAGGGGGACAATTCAGTTTGCAAAAGATCAAGGCCGAAACATAGTCTAAATTTAAAGGACCCATTAGAGGAACATGATTGCACGATTGTTTCAAAACCTGAAATTCAATATACACCTGCACTCAATAGCCACAAGGACCTCTTGTTGTCATCTGGATGGACGGTTGTCTCACAGGAAAGTTTCAGTGACCCCATCTATGTCTCTCCATCAGGTTCTCCTTACGGGTCCCTTCCGAAAGCTTTGGAGGCCTTTTCACGTGAAGCTTCTAAATTTAGAGAGAAGGAATGGGGTTCATCTCAATCAGTAGACACTTCCAGCAGGCATGTTGCAAAAAAAACCCATAAGAAAAAGAGGAATCAAAGGAGGACTAAAACTGTGACAGGACCTGTTGAGACTGTCATATTAGACAATACAATGCTACAGCAACAGGAGCTTAGTAAAAAAAATGACAAGGAATCCTCATCGGTTCCAGTAGAAATGGGATCTACAGAAGCACACAAGGCGGTGGCTTTCTGCAATTTAGAAGATCCGGCAAATTTCTGTATCAAAGATGAATGCTTGAGTAGTGAAATAAAAAAATTGGATTTAGGCAGCGTGTTAGTGGCAGATAATAATGAAAACTGTGTTACCGATTTACACCGAGATGACAAAACTCTTGGAGTTAGGGGGTCTGTGCTTATTAATGGTAAACATGTTGCAGTGAATAGCATATTCAACATGGAAATGGGGGACAGTGAAGAATATTCATCCAAATGTGTGGTCATGTTAACAGGGGACAAAGTCAAGGAAGCTTTACCAGTGCCAGAGGAAATGGGGTATGGACAAATACACGAGGTGATGGCAGTGGATGAGAAACTGAGATCCTGTATAAAAGATAAATGCTTGAATCATGACAAGAATGATTGCTGCAATCTGATAGTGATAAAGAATGATCAAAACATCAATGACGAGAAACAGCAAGATAGGGAGTTGCAAGGAGTTAGGAGATCTGTTCGTATTAATGGGAGACATGTTCCGGTGGATAGTGAATTGGATATGGAAATGTTGGATGGTGACTATTCTTTTGATTCATCTAATTCTGTAGACATTTTAACACTGGACATGCTACTAGGAAGGCAGGAACCTGATAATAAAGAAAATGAGAAGGAAGCCTCACATATGCTGGAAAAAAAGAGATATAGAGAAGTACGTGAGGTGTTGGCATCTTGTATGGTAGAGGAGAACGCAAGATCCTATGATTCTTTAGACATGTTAATGCAGGATATGCAACCACCGGATGAAGAACCTGATAAAGAAAATGGCAATGAAGCCTCACCATTTCCAGAACAAACGATATATGGAGAAGTACTTGAGGTGTTGGAATTTTGCATGGCAGATGAGAAGGGAAAATCCTGTAAAGATGACTGCTTGAGTAATGAAACCAAAAAGTTATATCGGAGCAATGTGACAGTAGTAAAGAATGATCAAAACAGAGACACCGACATCCACCAAGATTGTGAGTTGGTTGGAGTTAGGAGGTCCTCACGTATCAATGGGAGACATGTTCCTGTAGATAGTGAATTGGATGTAGAAATGTCGGCTGTTGACGATTTTATAGATACATCTCATTTTGTAGTCAAAAGAGTGGCAAAGATGGACAAGGATACAACAATGATTTCTAAGGTTAAGAATGTTGAGGGGGGGTTGCCCACAACAGGTAATATTTTCTTGAAGCAAACTGTCACAAAGAAATTTGATTACCAAAAGCCCACAAATCAGAAGCAATTGGAGAGCAACAGCATTCCAAGCAGGCACGGAAATATATCAAAGAAATGTGATGGGATAAAGACTCCTGTCTCTGAGAAACACTCTCCGTCGTCAAAGAAGAATGGGGCAAAGGCTCTGATGGCTGAGAAACGCTCTCCATCGTCAAAGAAGAATGGGGCAAAGGTTCTGATGGCTGAGAAACGCTCGCCATCATCTGCGAGCAAAAGGAAGTTGGTCGCTGGTGGATGTTCAAATGGGAAAAAGAAGAAAAAGAGGAGTGGTGGGTGCGGTCTCATGGTGAGGAGAACTAAAAAAGGGGATTGCGAAGAAAATATCTTGTCTGAAACAAAAGTTTGCATATTATCTTGGTTGATCGAGTCTGGTACTCTGGCAGAAAACGAAAGAGTGGTGTACAAAAGAAAGAATGGTAAGGGTAATATATTGAGAGGTTGGCTCACTGGAGGAGGAATCCGGTGTAACTGTTGCAAAAAAGTTTTGTCCTTGTCAGAGTTTGAAGCTCATGCTGGTAGTTTTCTTCATCAGCCCTGGAATAACACTTGCCTCATCTCTGGGAAGTCACTGATGCAATGCAAGAGTGAAGCATGGGAGAAAGAAAAGAAACAAAGGAAAATTGGTTTCCAAACAGTAGGAGTTGGTGATGCTGATCCTAGTGATGATACTTGTGGAATTTGTGCTGATGGTGGTCATTTGATATGCTGTGATGGTTGCCCTTCAACTTTTCACCAGGATTGCGTAATGCTCAAGTCTCTACCCACAGGCAGTTGGTATTGCCCATTTTGTAGATGCACATTCTGCATGCTGGTTGATCGTGGACTAGATAAGTCCAATGGGACCATGAGATTGCTCAGTTGTAATCAGTGTGGCAGCAAATATCATGGAGATTGTGTTTGGAAAAATGGCATGGACAAGATGTCGAAATCATTATCATATTGTGGGAAAAGTTGCGAGAAGGTTCACCAAGGGATGGGCCAAACGTTCAGGGTCTTAGTGAGCCCGAAGAGTGTGCCACATGTGGGCTATAATTGGCATGAACAACATGCGGGACAGGTAGCTGCCGGGCTATCGGATATGATTGGAGTCTCAAACCCTATAGGAGGGGGCTTTTCCTGGACCCTAGTAAGGCGTCTTGATGAAGAGGGTATCAGCTCAGATCAAAGGCAATCTTTTATCATGGAATGCAATGTAAAACTTTCTTTGGCGCTTTCGGTGCTACATGAGTGTTTCATTCCGTTAATGGATCCCAGAACTGGTCTAGATATGATTGCTCAAGCTGTTTACAATTGCGGATCAAATTTCAACCGTCTAAATTATGAAGGATTTCACACTGTGATTTTGGAGAAGGATGAGGAACTCATCTCAGTAGCAACATTAAGGCTCCATGGGACACTTTTAGCAGAAATGCCATTCGTTGGAACACGACCTATTTATAGACGGCAGGGCATGTGCCGTCGTCTTCTCAATGCCATTGAAGAAATGTTATCTTCGTTATATGTGGAGAAGCTGATTATCCCTGCAATCCCTGATTTGCTGGAGACCTGGATGACATCATTTTCGTTCAAGCAATTGGAGCTATCCCATAAAAATGAAATTAGGAATTTGAACATGATACTTTTTGCAGAAACAACGTTGCTGCAGAAGTCCATATGCAATGAAAATGCTAGAGATGAGAAGCAGGTCAACGTTTTTGGCATTCATGGTAAAGGAATCGATAGATCTCATCACTTGCAGAATTTTGCTGGCTGTCACAAAACTGATGTTCCTGAATATGGAAGACAGGGATTCAAAGGTGCTAACTTAGGGCCGTGTGAAGTGATAGAAGCTCCTACTGCTGATGATGCACTAGCCTTTCTCCGTTCAGAAGTTTCAAATGGATCCCTTTTTAAAGTTTTGCCCGTCCAAAGCCCATTAGTTCAAAATACAGACGTGGTTCCACAGAATCATGGAGAACCCATCCCATTAACATCAGTTGATATCATTCATTCCGAGGCTTCTGTGAGCCCTGAGATAGTTTCCATAGCAAATAGGCATGTCCCTAGATGGCTGCAAAGTGCTGACGAAGCTAAGGATGTTTGTGCTAATTCTCATAACCACACCCTCCCACTTGATAACCTTCTCAGTATTAGAAGCTAA 4392 0.4244 MVFAKLVGCSIGIDEMVPSATKQMGFGREEGSRSMFGWGSSSRSMIPVEDMEKGTLHGSFDLTLGMGSIGHGNGVQFSIPHESFSGGAEGVNLNEKERGPLGNFGFNGFTMVGISSEIKDRAVNGGSGISHTHQKKGTSKKTRLLKGDPEWLPEQRSCIRSPGVQKGDNSVCKRSRPKHSLNLKDPLEEHDCTIVSKPEIQYTPALNSHKDLLLSSGWTVVSQESFSDPIYVSPSGSPYGSLPKALEAFSREASKFREKEWGSSQSVDTSSRHVAKKTHKKKRNQRRTKTVTGPVETVILDNTMLQQQELSKKNDKESSSVPVEMGSTEAHKAVAFCNLEDPANFCIKDECLSSEIKKLDLGSVLVADNNENCVTDLHRDDKTLGVRGSVLINGKHVAVNSIFNMEMGDSEEYSSKCVVMLTGDKVKEALPVPEEMGYGQIHEVMAVDEKLRSCIKDKCLNHDKNDCCNLIVIKNDQNINDEKQQDRELQGVRRSVRINGRHVPVDSELDMEMLDGDYSFDSSNSVDILTLDMLLGRQEPDNKENEKEASHMLEKKRYREVREVLASCMVEENARSYDSLDMLMQDMQPPDEEPDKENGNEASPFPEQTIYGEVLEVLEFCMADEKGKSCKDDCLSNETKKLYRSNVTVVKNDQNRDTDIHQDCELVGVRRSSRINGRHVPVDSELDVEMSAVDDFIDTSHFVVKRVAKMDKDTTMISKVKNVEGGLPTTGNIFLKQTVTKKFDYQKPTNQKQLESNSIPSRHGNISKKCDGIKTPVSEKHSPSSKKNGAKALMAEKRSPSSKKNGAKVLMAEKRSPSSASKRKLVAGGCSNGKKKKKRSGGCGLMVRRTKKGDCEENILSETKVCILSWLIESGTLAENERVVYKRKNGKGNILRGWLTGGGIRCNCCKKVLSLSEFEAHAGSFLHQPWNNTCLISGKSLMQCKSEAWEKEKKQRKIGFQTVGVGDADPSDDTCGICADGGHLICCDGCPSTFHQDCVMLKSLPTGSWYCPFCRCTFCMLVDRGLDKSNGTMRLLSCNQCGSKYHGDCVWKNGMDKMSKSLSYCGKSCEKVHQGMGQTFRVLVSPKSVPHVGYNWHEQHAGQVAAGLSDMIGVSNPIGGGFSWTLVRRLDEEGISSDQRQSFIMECNVKLSLALSVLHECFIPLMDPRTGLDMIAQAVYNCGSNFNRLNYEGFHTVILEKDEELISVATLRLHGTLLAEMPFVGTRPIYRRQGMCRRLLNAIEEMLSSLYVEKLIIPAIPDLLETWMTSFSFKQLELSHKNEIRNLNMILFAETTLLQKSICNENARDEKQVNVFGIHGKGIDRSHHLQNFAGCHKTDVPEYGRQGFKGANLGPCEVIEAPTADDALAFLRSEVSNGSLFKVLPVQSPLVQNTDVVPQNHGEPIPLTSVDIIHSEASVSPEIVSIANRHVPRWLQSADEAKDVCANSHNHTLPLDNLLSIRS* 1464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01051 1463 CDD PHD2_CHD_II 975 1014 - -
Eupl05g01051 1463 SUPERFAMILY FYVE/PHD zinc finger 966 1020 IPR011011 -
Eupl05g01051 1463 ProSiteProfiles Zinc finger PHD-type profile. 972 1017 IPR019787 -
Eupl05g01051 1463 MobiDBLite consensus disorder prediction 274 288 - -
Eupl05g01051 1463 Pfam Tify domain binding domain 897 947 IPR032308 -
Eupl05g01051 1463 SMART PHD_3 974 1015 IPR001965 -
Eupl05g01051 1463 SMART PHD_3 1018 1070 IPR001965 -
Eupl05g01051 1463 CDD NAT_SF 1197 1257 - -
Eupl05g01051 1463 MobiDBLite consensus disorder prediction 260 291 - -
Eupl05g01051 1463 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1189 1257 IPR016181 -
Eupl05g01051 1463 PANTHER PHD FINGER PROTEIN 12 756 1327 IPR042163 GO:0003714|GO:0045892
Eupl05g01051 1463 MobiDBLite consensus disorder prediction 748 841 - -
Eupl05g01051 1463 Pfam PHD-finger 975 1016 IPR019787 -
Eupl05g01051 1463 MobiDBLite consensus disorder prediction 767 803 - -
Eupl05g01051 1463 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1157 1294 IPR000182 GO:0016747
Eupl05g01051 1463 MobiDBLite consensus disorder prediction 748 764 - -
Eupl05g01051 1463 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 965 1026 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01051 Eupl-Chr5 32378875 32407996 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01051 818 1302 PHD Transcription Factor Family AT4G14920 41.700 7.39e-122 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01051 - - nnu:104589890 1191.79