Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01043 ATGTCTCAAGCAAAAGAAGCCCCTCTAGATGGAGCTTACTATGGTCCCCCTATCCCTCCTCAGCAAGCCTATCATAGGCATCAAGGATGTTGTGTGCTTAGCACCCTGATGAAGGTGTTCATCGCCACCTGGCTCAGTCTTGGCATTGCTGCACTTGTCTTCTGTATCGTTGTACGTCCTAATAAGGTAAAATTCTATGTAGTGTCCGCCGATCTCACCCAATTTGATCTTACTAATGGTAATACCCTTATTTACAACCTCACCTTAGACGTGGCTGTGAGGAACCCCAACAAGAAAATCGGTATTTACTTCGATACGCTGGACGCTACGGCTTGTTACGACGGGGAAAGGTTCGGTTGGATGAGCCTGCCACAATTCTACCAAGGTCATAAGAATACTACCACTCTCCATCTGATCTTCCGTGGACAATCTGTGATGGTACTTGGGGATCCGATATCAATGATTTCAATGGGGAGAAGAGCACAGGATTTTTCTATATCGACGGGATGCGATTGTGGGCCATGTTGCTTACTAGGCCTGTTATGCAAAATCATAGCCACAATCGCGATCCTGGTGGGCATCGCCATCCTCGTGCTCTGGCTAGTCTTTCGCCCGACCAAGGTGAAATTCCATGTTGTTAACGCCTCCCTTACCGAATTCAATCTGACGACCAACAACACACTTCATTACAACCTTGCACTCGACATCGCCGTGAGGAACCCCAACAAGAAGATCGGTATTTACTATGATCGGATCGAAGGTAGAGCTTACTATGAGGACGAGGAGTTCGCTACGCAGGATTTGACTCCTTTCTACCAAGGCCATAAGAACACTACCATGCTTCATCTGGACTTCAAAGGCCAATATCCAGTAGTACTTGGGGGTTCCGAACTCATAGATTTCAACGAGGAAAAGAGGGTTGGACGTTTTAGTGTTGATGTGAAGCTTTACCTTCGGATTAGGTTCAAGTTTGGAGATTTCAAGACTAAGCGCTTTAAGCCGAAGATCAAGTGCGATTTAGAGCTTCCTTTGGGTTCTACGACTGGTGGATTCAATACTGAGAAGTGCGACATCGATTTCTGA 1083 0.4645 MSQAKEAPLDGAYYGPPIPPQQAYHRHQGCCVLSTLMKVFIATWLSLGIAALVFCIVVRPNKVKFYVVSADLTQFDLTNGNTLIYNLTLDVAVRNPNKKIGIYFDTLDATACYDGERFGWMSLPQFYQGHKNTTTLHLIFRGQSVMVLGDPISMISMGRRAQDFSISTGCDCGPCCLLGLLCKIIATIAILVGIAILVLWLVFRPTKVKFHVVNASLTEFNLTTNNTLHYNLALDIAVRNPNKKIGIYYDRIEGRAYYEDEEFATQDLTPFYQGHKNTTMLHLDFKGQYPVVLGGSELIDFNEEKRVGRFSVDVKLYLRIRFKFGDFKTKRFKPKIKCDLELPLGSTTGGFNTEKCDIDF* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01043 360 Pfam Late embryogenesis abundant protein 91 139 IPR004864 -
Eupl05g01043 360 Pfam Late embryogenesis abundant protein 236 338 IPR004864 -
Eupl05g01043 360 PANTHER OS05G0367900 PROTEIN 34 142 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01043 Eupl-Chr5 32221743 32228792 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01043 202 350 SNARE and Associated Proteins AT1G32270 37.908 2.52e-29 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01043 - - nnu:104589984 236.113