Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01037 ATGGAGAACAGGATAAGAGGAGAGGCCGCCGCTGATGGCACATCGAAGCAAGGTGAGGTTTCGACTGCCCGTGCTATGGAGCGCCGGGTTACAGATGTTACCTTGGCATCCATGGAGAGCGCGTCGAAGAATCGGGACTCGAACGGCGAGTTGAACTCCGGGAGAGTGTCAGGGGAGGAGCAGGTGATTCGTTGGGAGCGGTTTCTGCCTCAGCGGGTACTCAGGGTTTTGCTCGTCGAGAACGACGATTCGACTCGACATATAGTCGCCGCTCTGCTCAGGAAATGCAGCTACCAAGTTGCTGCAGTTGCAGATGGGCTCAAAGCTTGGGAGGTCCTAAAGGAGAAGCACTATAATTTTGATATTGTTTTAACTGAAGTAGTGATGCCTTCACTATCGGGGATTGGTCTTCTTTCCAAGATAATGAGCAATGAGATATGCAAAAATATTCCTGTAATCATGATGTCTTCACACGATTCCATGGGCGTAGTGTTTAAATGCATGCTGAAGGGTGCTGCAGACTTTCTAGTGAAGCCAGTCAGAAAAAATGAGTTGAGAAACTTATGGCAGCATGTTTGGAGAAAGTATTGTCTTAAACCCTTCTTGCAGTCTAGTAATTGTGGAAATGGATCTGAAAATGGAGAACCGAACCAGACAAGACTTGAGGTTGTGTATGACAATGAGGCTGCTGGTAAACATGAAAATGCAGATGCTGGCCACAATTCTAAGACGGGGGATAGTTCTGATGGAAAACGAAGTGATACTCAGAGCTCATGTAGTAAACTAGTGACTGAAATTGAAAGTGTGTGGAAGCAAGGTGAACCTCTGGAAAATGAATATAGGAGCTTTCACAAGGAAACTGATTCAAAACTAGAAAAGCATGACAGTAAAATGGCTGAGGTTGAAACATCATCAGTTCATGAGAAGGGCAAAACAAAGGATAAGTCGACAGAGATAGAAATCAAAGTAACTCTATCTATTAATGAAGCTGTTTCAACTGAAAAAGTTTTGGAGGAGAATGGTTTTTATGATGGATTCCCATGCAGGGAGGAAGACCCAGTTTCTATTAGAAGTAAAGAGTGTGGAAATATTGATTCCGAGCTTCTTGATCAAAATGTTGAGATAAACGAACCTTCAAAAGAGATTTTTGACTTCATTGGGACGGCTACTACTGAACGATGCAATTATCCAGTCTTGGAACATAATGATCACTGGCAGGATAGTTTGCGTGAACTTGCAAAGTCCTCTGATGCAAGGGGGAACACTTGTAATTCTGGTTCCTCACCATTGTGGGAGCTCTCTTTAAGAAGACCACAGCTGGAAGGCCAGGATGAGGAAGCTTTTCAGGAAAAGCATATACTAAATCATTCTGATGCCTCTGCATTTTCAAGGTATGGAAATGCAAGGATTCGTCTTCCCTGCCCAAGGTCAGGATCATCGTCAGCCAATTTATGCCTTAGAACCAATGAATGTGGCAGTTCAACTGCTGATCATGGCAATGAAGCTCCAATATACTGCCAGATTTCATCTGCTAGCAACAAGGAAGATGCCGGCGTTTTGTCATCTGTTCCCTCAAGAGAAAATATGTGCGTTGGTCATTCATCCACCGGGAGGACAGTTTTTCCTCCCCCTCAACTTGGGGTCATACCACTTCATATTCCTGTTAGAGCGATACCCTTCCAAAACTTGTGTGCCAGCTATGGTGCTGTACTGCAACCGGTTTTCTATCCAGAACTTTCTGTATCCTTTCCTGGTTCAGCTGAAGTTGAGAAGGAAATAGAGGAAATTCCTTCCAATCCCTCTACTCACAACTGTAATCACCTTATCAAGAATCCCCAACATTTGAATTGTCACCACTTTGTCGAGAACCCCCGTCCCCATCAGATGAACCAAGGCATGGAGGAGCAAAGGGCAGATATTGAGCCCACGGATCCTATCGTGATGGTGCATACTCCTGCAGAAAAGGCCAATCAAAGTGGTAGCTGCAGTCGTGGTATTACCATTGTTAGTGGAAGCAATGGTAGTTATGAGGAAACGAGTGTGGCTGTCAATGCAGGATCTGTTCTAGAGAGTGGAAATGAAGATGGATTCCAAGACTGCAATGGGCAAGGGTATGGTTGTGATCGTTCTCGACGTGAGGCTGCATTGACCAAATTTCGCTTGAAAAGAAAGGACAGATGCTTTGAGAAAAAGGTTAGGTATCATAGTAGGAAAAAGCTCGCCGAGCAAAGACCACGATTGAAAGGACAATTTGTGCGTCAGGCAGTTGTTGCTGAATCAACCACTATAGCTGCAGAATCAGAAGATTGA 2310 0.4459 MENRIRGEAAADGTSKQGEVSTARAMERRVTDVTLASMESASKNRDSNGELNSGRVSGEEQVIRWERFLPQRVLRVLLVENDDSTRHIVAALLRKCSYQVAAVADGLKAWEVLKEKHYNFDIVLTEVVMPSLSGIGLLSKIMSNEICKNIPVIMMSSHDSMGVVFKCMLKGAADFLVKPVRKNELRNLWQHVWRKYCLKPFLQSSNCGNGSENGEPNQTRLEVVYDNEAAGKHENADAGHNSKTGDSSDGKRSDTQSSCSKLVTEIESVWKQGEPLENEYRSFHKETDSKLEKHDSKMAEVETSSVHEKGKTKDKSTEIEIKVTLSINEAVSTEKVLEENGFYDGFPCREEDPVSIRSKECGNIDSELLDQNVEINEPSKEIFDFIGTATTERCNYPVLEHNDHWQDSLRELAKSSDARGNTCNSGSSPLWELSLRRPQLEGQDEEAFQEKHILNHSDASAFSRYGNARIRLPCPRSGSSSANLCLRTNECGSSTADHGNEAPIYCQISSASNKEDAGVLSSVPSRENMCVGHSSTGRTVFPPPQLGVIPLHIPVRAIPFQNLCASYGAVLQPVFYPELSVSFPGSAEVEKEIEEIPSNPSTHNCNHLIKNPQHLNCHHFVENPRPHQMNQGMEEQRADIEPTDPIVMVHTPAEKANQSGSCSRGITIVSGSNGSYEETSVAVNAGSVLESGNEDGFQDCNGQGYGCDRSRREAALTKFRLKRKDRCFEKKVRYHSRKKLAEQRPRLKGQFVRQAVVAESTTIAAESED* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01037 769 ProSiteProfiles Response regulatory domain profile. 75 193 IPR001789 GO:0000160
Eupl05g01037 769 MobiDBLite consensus disorder prediction 35 55 - -
Eupl05g01037 769 Pfam Response regulator receiver domain 76 187 IPR001789 GO:0000160
Eupl05g01037 769 MobiDBLite consensus disorder prediction 232 250 - -
Eupl05g01037 769 ProSiteProfiles CCT domain profile. 712 754 IPR010402 GO:0005515
Eupl05g01037 769 MobiDBLite consensus disorder prediction 232 258 - -
Eupl05g01037 769 Pfam CCT motif 712 754 IPR010402 GO:0005515
Eupl05g01037 769 PANTHER TWO-COMPONENT RESPONSE REGULATOR 74 268 IPR045279 GO:0009736
Eupl05g01037 769 SUPERFAMILY CheY-like 74 199 IPR011006 -
Eupl05g01037 769 CDD psREC_PRR 76 179 - -
Eupl05g01037 769 MobiDBLite consensus disorder prediction 285 312 - -
Eupl05g01037 769 MobiDBLite consensus disorder prediction 1 55 - -
Eupl05g01037 769 SMART REC_2 74 189 IPR001789 GO:0000160
Eupl05g01037 769 Gene3D - 74 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01037 Eupl-Chr5 32132933 32144522 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01037 658 754 Response Regulator Gene Family AT5G24470 50.515 2.91e-20 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Eupl05g01037 Response_reg 1e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01037 K12130 - nnu:104601381 856.284