Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01018 ATGGGGGTTTTGCTGAAACAAGCTCTGAAGTGCCTCTGCAGCGAAAATCGGTGGTCTTATGCGGTTTTCTGGAAGATCGGTTGCCGGAATCCAACGCTCTTGGTTTGGGAAGAATATCATTATGAGCCTGCTCGGGATTCTGCTCTTCTGGGTGTTTCGGGGATTGAGAGTACAGAACTGCTTCTTAAAGAGTGGGAAGGGCTTTGGACTTCTCATGAAGGTCGTTTTCCTCAGCTAGGTTGTCAAGCCGAGGATAGAGTGGGTTTAATCATTAACAAGATGATGAATAATAACCAGGTCCATGTTGTAGGAGAAGGGATAGTTGGGCGTGCTGCTTTTACAGGATATCATCAATGGATTCTTCAAGAAAACTGCATGAGTGAAGGGTATCCATCAGAGGTTCTGGCTGAGGTGCACCACCAATTTTTGGCTGGCATGCAGACAATTGCGGTTATTCCTGTGCTTCCACATGGTGTTGTTCAACTTGGTTCCACACTGGCAATTGTGGAGAATATGGGGTTTGTGAACGACGTGAAGATTTTGTTTGTTCAACTAGGAGGTGTGCCTGGTGCTCTTTTATCTGATAATTATACTAAAAAAGAACCTGGCCAGAAGATCGGAGTATCCACTTCACTTGGAATACCTATCTCTGCAGACCCAGCTAGAAATTCCTGTTCTCAAGTAGCAAGATTCACACCTTTTGTCGGTGCCAGCTGCCACCAACAAATCTCCACATCTCAGGCTTCGGGTCTTGTGAGTCAACCTTCTCATTCCTCAACTACACAGATTCAGCACAACATGCAAGCTAATGCTTTAGCATTGCAAACAATCCCCAGCCTGACCCCAACTACGTCCAAATCTCTGAATGACCTCTTCCCGAGAAAGGCTCTTCCTGTAATGAAGCCAAACCTTCCTCTCAGAGGACAACTAGAAACTGGAGCAATTGGAGCCCAGGTGATTCTCTCCAGTTCAGATGCGCGGTTAAACCAGTGGGCTCCTCCATATAATTCAAGTTCCAGGTTCAATCACCAACTTGTCCAATCTGGCTCATCTTGTAGCAGCCTAACATTCATGGAACAACAGATCCTATCAGGTGCTGGGTTGCGGGAGCCTGTTAATAACAGCTCACACACATCAAATTACACTAATAGATCTCAATTACGATCCAATGGAGGCACAATCCGTAATTCTCTCAAAGATTCTGTAATTGTCTCATTGCTCGGCGGAAGTGAGTCACCTAATAATGAAAATGGTATTCACACGCTAACTTCAATTCAATGTTCTCATTCAATCTCAAGTGGATCAGCTAAGAGTAATTCATCTTTCCCATCTCTGGAAGGGCTTCAACTTAATTCATCTGATATGGGTGTGATTCCTGTATCCAATCACGCAAATCAGCCAAATGGCAGTGATGTGCTTCCTGGGGTGCCGCATCGAATCCATCCCTCTATTGACGACAATCATGCCCGAACTGAGTGGGCTGCAGGGAAACAGGTGATAGAGAATGATTTATTTCAAGCCCTTAACATCCCGTCAGTTCATCCTGGTGAGCAGATTTCTAATAGTGGACCCATGCCTGATTTTCTTCATGATTGCTGGATGACCAGTTCAAAGCATGATAAGGGAAGTCCAAGATCCCAAAATATCACCTGTGAAGATGCATGTGTGCAAACCCCTGCAGGAGATGACTTGTTTGATATCTTGGGTGTGGATTTTAAAAGCGAACAACTTCATGGCAGTTGGAACAATTTGCTTATTCATGGGGCAGATGCCAACACACAGAACGTGAGTAGGGATCTTTCCACATGCATTACTCAGGTGGATGCTGGTTCTGATTCTTATGCACTGAATTCTGGGATCTCAGAGAGTGGGATCTTCTCTGAAACTGGGCCCGACCATCTGTTGGATGCAGTGGTATCGAAGGTTCACTCCAGTGCTAAGCAGAACTCAGATGATAACGTGTCTTGCTGGACAACATTAACAAAGTTAAGTAACTCTTCAGCTCCTACTGATTCTTCCCCATATAAATGGGTTAGTGTGCCACGTCAAAAGAAAGAAGAGTTGTTTGGTCTTCCTCCACCTCTTGCAAAAGCACAGATAGTGGGATCGAGCTCTTTTAAATCTGGATGTAGCAAGGATAATTCTGTAGAGTGCTCTCAAAGTAATTCCATGCATAGATCTCAAATCAGTTTATGTGTTGAAGAGGGTCAGAATATGAAGCGTGATAATAGTACTTCAACTGCACATTCTAAGAGGCCTGATGAAATGGGGAAATCAAATCGGAAAAGGCTTAGACCTGGAGAGAGCCCTAGACCTAGGCCCAAAGATCGCCAGATGATCCAAGACCGTGTGAAGGAATTACGTGAAATTGTACCAAATGGGTCAAAGTGTAGCATCGATGCACTGCTGGAACGCACCATTAAGCACATGGTTTTCTTGCAAGATGTGACGAAGCATGCAGACAAGCTAAAACAAACTGGGGAGTCAAAGATTATTAGCAAGGAGGATGGTGTGCTCTTGAAGGACAACTTTGAGGGTGGTGGGGCAACATGGGCTTTTGAAGTAGGTTCACAACCCATGGTTTGCCCAATCATAGTTGAGGATCTGAATCCACCTCGTCAAATGCTTGTGGAGATGCTTTGTGAAGAACAGGGTTTCTTTCTAGAGATAGCCGATATAATTAGAGGACTGGGATTGACCATCTTGAAGGGGGTGATGGAAGCTCGTAACGACAAGGTCTGGGTGCGTTTCACAGTAGAGGCAAAGAGGGATGTGACAAGAATGGAAATATTTTGGTCACTTGTTCAACTTTTAGAACAAGCAACGAAGAGCAGTGCAGCAGCATCCAAGGGCACTGATAGCGGTGATATAATGGCACATAATACTTTCCATCAAGCTTCCATACCTGCGACTGGTCCTGATAGCTTTCAGTGA 2934 0.4482 MGVLLKQALKCLCSENRWSYAVFWKIGCRNPTLLVWEEYHYEPARDSALLGVSGIESTELLLKEWEGLWTSHEGRFPQLGCQAEDRVGLIINKMMNNNQVHVVGEGIVGRAAFTGYHQWILQENCMSEGYPSEVLAEVHHQFLAGMQTIAVIPVLPHGVVQLGSTLAIVENMGFVNDVKILFVQLGGVPGALLSDNYTKKEPGQKIGVSTSLGIPISADPARNSCSQVARFTPFVGASCHQQISTSQASGLVSQPSHSSTTQIQHNMQANALALQTIPSLTPTTSKSLNDLFPRKALPVMKPNLPLRGQLETGAIGAQVILSSSDARLNQWAPPYNSSSRFNHQLVQSGSSCSSLTFMEQQILSGAGLREPVNNSSHTSNYTNRSQLRSNGGTIRNSLKDSVIVSLLGGSESPNNENGIHTLTSIQCSHSISSGSAKSNSSFPSLEGLQLNSSDMGVIPVSNHANQPNGSDVLPGVPHRIHPSIDDNHARTEWAAGKQVIENDLFQALNIPSVHPGEQISNSGPMPDFLHDCWMTSSKHDKGSPRSQNITCEDACVQTPAGDDLFDILGVDFKSEQLHGSWNNLLIHGADANTQNVSRDLSTCITQVDAGSDSYALNSGISESGIFSETGPDHLLDAVVSKVHSSAKQNSDDNVSCWTTLTKLSNSSAPTDSSPYKWVSVPRQKKEELFGLPPPLAKAQIVGSSSFKSGCSKDNSVECSQSNSMHRSQISLCVEEGQNMKRDNSTSTAHSKRPDEMGKSNRKRLRPGESPRPRPKDRQMIQDRVKELREIVPNGSKCSIDALLERTIKHMVFLQDVTKHADKLKQTGESKIISKEDGVLLKDNFEGGGATWAFEVGSQPMVCPIIVEDLNPPRQMLVEMLCEEQGFFLEIADIIRGLGLTILKGVMEARNDKVWVRFTVEAKRDVTRMEIFWSLVQLLEQATKSSAAASKGTDSGDIMAHNTFHQASIPATGPDSFQ* 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01018 977 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 182 IPR025610 -
Eupl05g01018 977 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 764 813 IPR011598 GO:0046983
Eupl05g01018 977 MobiDBLite consensus disorder prediction 735 779 - -
Eupl05g01018 977 CDD bHLH_AtLHW_like 768 837 - -
Eupl05g01018 977 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 971 IPR043561 GO:0003700|GO:0006355
Eupl05g01018 977 MobiDBLite consensus disorder prediction 745 779 - -
Eupl05g01018 977 MobiDBLite consensus disorder prediction 368 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01018 Eupl-Chr5 31837859 31845982 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01018 531 943 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 51.887 1.01e-111 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01018 - - nnu:104590260 1181.01