Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01017 ATGGCGACGTACTTTCACGGAAATTCGGAAATCCAGGCTGATGGTCTGCAGACGCTTTATCTGATGAACCCTGGTTATGTCGGATACTCTGACACACAGCCCACAGGCAACATGGTTTTCCTCAATTCTGCCGGAAACACTCTAAATCCGGCTAACCTATCTCATGCTCACGCGCAGCAGCAGAATCAGCACTTTGTGGGAATCCCACTTCAGGCCTCGGCTGCTGCAGCTGCCGGGTCTGCGGCGTCGCATGATCCTAATCGTTCATCGGTGCATGCTCAGCATGAGATCTCAGCCATACATGGCTTTCTCCCTCGTGTTCACTACAACTTATGGACGTCCATGGATCCGAATTCAGCATCCGGAAGTCAACAGGCCCACCACCAGCACCAGATTCCGACGACAGGCGGAGCGGCGAACAATTCAGTTGGTGTCGCCGATGTTACGTCGCAATTGGGTCTTCGGCGCTCAGTCTTGTCACCTTCTCAACAAGGTTTGTCTCTGAGCCTTTCGCCACAGCAGACGGCTTATGGGTCGTACCGGCCGGAATCTGACATTCCAGTCACAGCTCCGGCACCAGCGATATCTCCCACTAGTGGCGACGATATGCGGGTATCCGGCGGCTCCTCTTCGTCAGCATCTGCAATTTCAAATGGGACTTCTGGTATGCAGAGTGTTCTGTTGGGTTCTAAGTACTTGAAGGCAGCACAACAGCTTCTTGACGAAGTCGTTAATGTGGGGAAGGGAATCAAGACTGAATTGTCCAAAGGGTCTAAAGGGCAGATGAAGATGAGCAGAGAATCGACTGCTGCAATGGGAGAAGGTTCCACTGGAGGCGAATCGAGTGCGAAACGTGGAGCCGACCTCACAACAGCCGAAAGACAGGAGCTTCAGATGAAGAAGGGGAAGCTTGTTAGCATGCTAGATGAGGTGGAGCAAAGATACAGGCAATACCACCACCAGATGCAGATTGTAGTTTCTTCGTTTGAACAAGCAGCAGGATTTGGTTCTGCGAAAACATACACGGCTCTTGCTTTGCAGACTATCTCAAAGCAATTCCGGTGTTTGAAAGATGCCATTTCTGGGCAAATCCGATCCACAAGCAAGAGTTTGGGAGAAGAAGATTGCTTAGGAGGCAAGGTTGAGGGTTCAAGACTTAGGTTCGTTGATCATCAGCTTCGACAACAGCGGGCACTTCAACAGCTGGGAATGATCCAACACAACGCTTGGAGACCACAGAGAGGATTGCCTGAGAGATCGGTTTCTATTCTTCGTGCTTGGCTCTTCGAACACTTCTTGCACCCCTATCCTAAGGATTCAGATAAAGTCATGCTTGCAAAGCAAACAGGACTCACTCGAGGCCAGGTATCTAACTGGTTCATAAATGCTCGGGTTCGGCTTTGGAAGCCAATGGTTGAAGAAATGTACACAGAGGAAGTTAAGGATCAAGACCAGAATGGCTCGGAGGAGAAAACAAGCAAGAGCGAACTTAATGAAGAATCGGGGTCAAAGTCCACTGCTCCCCAAGTAAACAGTCCCATGAGAACAGACCAGACCAAAAATCTCAATTCCAAACAAGACAATCTCACTGATCCAAATGCTCCTCCCATTCCTCATTCAACAGTTCAAACATCCGTCATGGAAGGAAACATTCGATCCCAATCTGGCTTCTCCCTCATTGGATCGGATGGGGAAGGGATTGTACGAGGAAATACCAAGAAATCGCGGAACTCCGAACCGCAACATTCCCCCACTAGTATTCCATTAATGGACATGGACATGAAATCCAGCATGAAATTCGGGAATGAAAGGCAGGGTAGGGATGGTTACTCGTTAATAACAGGAATACAAACCATGGAGGAGCATTTGGGAACTACGCAATTGGAGAGATGGGGAGGTTCGACGCCGAGCAATTCACACCAAGGTTCTCGGGCAATGGAGTTTCTCTCACTCTAG 1956 0.4949 MATYFHGNSEIQADGLQTLYLMNPGYVGYSDTQPTGNMVFLNSAGNTLNPANLSHAHAQQQNQHFVGIPLQASAAAAAGSAASHDPNRSSVHAQHEISAIHGFLPRVHYNLWTSMDPNSASGSQQAHHQHQIPTTGGAANNSVGVADVTSQLGLRRSVLSPSQQGLSLSLSPQQTAYGSYRPESDIPVTAPAPAISPTSGDDMRVSGGSSSSASAISNGTSGMQSVLLGSKYLKAAQQLLDEVVNVGKGIKTELSKGSKGQMKMSRESTAAMGEGSTGGESSAKRGADLTTAERQELQMKKGKLVSMLDEVEQRYRQYHHQMQIVVSSFEQAAGFGSAKTYTALALQTISKQFRCLKDAISGQIRSTSKSLGEEDCLGGKVEGSRLRFVDHQLRQQRALQQLGMIQHNAWRPQRGLPERSVSILRAWLFEHFLHPYPKDSDKVMLAKQTGLTRGQVSNWFINARVRLWKPMVEEMYTEEVKDQDQNGSEEKTSKSELNEESGSKSTAPQVNSPMRTDQTKNLNSKQDNLTDPNAPPIPHSTVQTSVMEGNIRSQSGFSLIGSDGEGIVRGNTKKSRNSEPQHSPTSIPLMDMDMKSSMKFGNERQGRDGYSLITGIQTMEEHLGTTQLERWGGSTPSNSHQGSRAMEFLSL* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01017 651 MobiDBLite consensus disorder prediction 163 180 - -
Eupl05g01017 651 Coils Coil 294 314 - -
Eupl05g01017 651 Pfam Associated with HOX 226 361 IPR006563 -
Eupl05g01017 651 MobiDBLite consensus disorder prediction 202 218 - -
Eupl05g01017 651 ProSiteProfiles 'Homeobox' domain profile. 407 470 IPR001356 GO:0003677
Eupl05g01017 651 Pfam Homeobox KN domain 427 466 IPR008422 GO:0003677|GO:0006355
Eupl05g01017 651 Gene3D - 406 484 - -
Eupl05g01017 651 SMART prehox3 221 362 IPR006563 -
Eupl05g01017 651 MobiDBLite consensus disorder prediction 478 498 - -
Eupl05g01017 651 CDD homeodomain 410 471 IPR001356 GO:0003677
Eupl05g01017 651 MobiDBLite consensus disorder prediction 556 590 - -
Eupl05g01017 651 MobiDBLite consensus disorder prediction 118 142 - -
Eupl05g01017 651 FunFam BEL1-like homeodomain protein 9 413 475 - -
Eupl05g01017 651 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 119 494 - -
Eupl05g01017 651 SMART HOX_1 410 474 IPR001356 GO:0003677
Eupl05g01017 651 MobiDBLite consensus disorder prediction 163 218 - -
Eupl05g01017 651 MobiDBLite consensus disorder prediction 258 276 - -
Eupl05g01017 651 MobiDBLite consensus disorder prediction 478 541 - -
Eupl05g01017 651 MobiDBLite consensus disorder prediction 254 287 - -
Eupl05g01017 651 MobiDBLite consensus disorder prediction 631 651 - -
Eupl05g01017 651 MobiDBLite consensus disorder prediction 499 541 - -
Eupl05g01017 651 SUPERFAMILY Homeodomain-like 411 477 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01017 Eupl-Chr5 31799563 31804917 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01017 1 514 Homeobox Transcription Factor Family AT2G35940 50.626 7.44e-137 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Eupl05g01017 POX 8.2e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01017 - - nnu:104601407 889.797