Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00996 ATGGGTGTCTCTGGGAAATGGCTTAGAACGTTGGTTGGTTTAAGGAAGTCGGAAAAATCACGATCTTCAGAGAAGAATGAGAATAGGACGGAAGCTGGTGGTCGATTTTGGCACCGGAGAAAGCACTCTGTCGAGATTGATGGTGATATTCTTAATGATGAGTTTGCTCACAACACAGCTCCACTACCGGGAGTTGCCAATATCCAAACAAACTCAGATACTGCCAGCTCTCCTGCTAGCTCACACCAGGTTCAGACATCATTCCAAATTCAACCAAATGTCAAAGAGGAATGCGCTGCCACGCACATCCAGACAGCGTTTCGAGGATTTCTGGCTAGACGAGCACTGAGAGCTTTGAAAGGATTGGTTAGACTTCAGGCCCTTGTCAGGGGCCATGCTGTGAGAAAGCAAGCAGCGATAACTCTTCGTTGCATGCAAGCTTTGGTTAGAGTTCAGGCTCGTGTCCGTGCAAGGCGTGTTCGCATGGCCCTGGAAAGTCAGATGGCTCAACAAAAACTTCAGCAAGAACTTGTACATGAGGCTCACGTTCGAGAAATAGAGGAAGGGTGGTGTGACATTGTTGGATCCGTGGAGGATATTCAAGCCAAGTTGTTAAAGAGGCAAGAAGCTGCAGCCAAGCGTGAGAGAGCTATGGCATATGCACTGGCTCATCAGTGGCAGGCAGGATCAAGACAGCAGGCAACCCCTGCCGGGTTTGAACCAGATAAAAGCAATTGGGGTTGGAACTGGTTGGAGAGATGGATGGCTGTTCGTCCATGGGAGAACCGATTCCTTGACATTAATCTTAGAGATGGAGTTATGATCTGTGAGAATGGATCAGCGGAAGGAAAGAATGGCATCAAGACCCTGTTCAGATCTACCGGAAAGAAAGCCATTTCATCAAACCTTCATTCGAATTTCTCAGATAAAAAAACTGGCATATCTCAATCTGATGGAAGTGGCTCTTCATCCAGCAGGTCAGCTAGCGCGTTGGCAACACCCAACACACTGTCGAGCAAGCCAAAACCTAAGCCATCTCCCGAGGAGCCGATTGAAGAAGCCAGCTCAAAACCTTCTGGGAATGGGCCTAGATCCTTCAGTAATCCTAAAGAGAGACCCACACAACCAGATACTCAGGCAAAAAAGCGGTTGTCCCTGCCAAGCAGTGGTGTTGGGCCACAAACAGGCAGACGTCGAAGTAGAACCATTGCAGATAGGACACCCAATGCACCAAAGCCCGTCAAGGAGAAATCCAAGTTTACCAGAAGACATAATTCAAACCCGACAAATTCTGTCCCACTGGGTCTTGAGCTGCAGATTTGA 1323 0.4822 MGVSGKWLRTLVGLRKSEKSRSSEKNENRTEAGGRFWHRRKHSVEIDGDILNDEFAHNTAPLPGVANIQTNSDTASSPASSHQVQTSFQIQPNVKEECAATHIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRMALESQMAQQKLQQELVHEAHVREIEEGWCDIVGSVEDIQAKLLKRQEAAAKRERAMAYALAHQWQAGSRQQATPAGFEPDKSNWGWNWLERWMAVRPWENRFLDINLRDGVMICENGSAEGKNGIKTLFRSTGKKAISSNLHSNFSDKKTGISQSDGSGSSSSRSASALATPNTLSSKPKPKPSPEEPIEEASSKPSGNGPRSFSNPKERPTQPDTQAKKRLSLPSSGVGPQTGRRRSRTIADRTPNAPKPVKEKSKFTRRHNSNPTNSVPLGLELQI* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00996 440 ProSiteProfiles IQ motif profile. 145 172 IPR000048 GO:0005515
Eupl05g00996 440 ProSiteProfiles IQ motif profile. 96 124 IPR000048 GO:0005515
Eupl05g00996 440 MobiDBLite consensus disorder prediction 358 396 - -
Eupl05g00996 440 Gene3D - 97 138 - -
Eupl05g00996 440 SMART iq_5 118 139 IPR000048 GO:0005515
Eupl05g00996 440 SMART iq_5 95 117 IPR000048 GO:0005515
Eupl05g00996 440 MobiDBLite consensus disorder prediction 424 440 - -
Eupl05g00996 440 MobiDBLite consensus disorder prediction 302 440 - -
Eupl05g00996 440 MobiDBLite consensus disorder prediction 62 81 - -
Eupl05g00996 440 ProSiteProfiles IQ motif profile. 120 147 IPR000048 GO:0005515
Eupl05g00996 440 MobiDBLite consensus disorder prediction 302 339 - -
Eupl05g00996 440 Pfam IQ calmodulin-binding motif 98 117 IPR000048 GO:0005515
Eupl05g00996 440 MobiDBLite consensus disorder prediction 15 34 - -
Eupl05g00996 440 PANTHER IQ-DOMAIN 5-RELATED 1 393 - -
Eupl05g00996 440 MobiDBLite consensus disorder prediction 63 81 - -
Eupl05g00996 440 MobiDBLite consensus disorder prediction 399 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00996 Eupl-Chr5 31402865 31415255 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00996 1 428 IQD Protein Family AT3G22190 56.481 2.60e-125 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00996 - - nnu:104590702 574.318