Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00960 ATGGAGACATCATCGGGACCAGCAAGGACGAAATCAGATCAGTTGGAGACAGCAATGAAGAAATCGCCGAACCGAGCAATTTTGAATGATGCCGAGGGTGGGTCGAGCATAGCCAGGAAGTCGAGTTTTGGGAAGCGAATTGCTTCACCCGGGCACATGACACACATAAGGAAGTCACGGAGTGGGCAGTTGAAGTTGGAGTTGGATGAGGTGAGTAGCGGAGCTGCCCTGAGTCGAGCCTCCAGCGCCAGCTTGGGCTTCTCCTTCTCTTTCGCTGGCTTCACTATGCCTCCTGAGGACATCGCCGATCTACGAGGATTTAGCGACGATGATATACCGGAGGATCTTGAAGTTGGTACACGCAAAACGGTTCATATGGAGCCCACCTTGCCGATTTATCTTAAGTTTACAGACGTGAAATACAAGGTAGTTCTCAAAGGCGTGAGGACCACAGTAGAGAAGGATATCTTACATGGGATAACAGGTGCAGTGAGTCCAAGAGAAGTTTTGGCATTGATGGGACCTTCCGGCTGTGGAAAGACCACGCTCCTCAATCTGTTGGGTGGAAGGTTAAATGAATCTGATTCAGGTGGTTCCATTACTTATAATGACCAGCGGTATTCGAAGTCTCTAAAACGCAGGATAGGATTCGTGACTCAAGACGACGTTCTATTTCCTCACCTTACAGTGAGAGAAACATTGACGTATGCAGCACTCCTACGGCTGCCGAAGACATTGACAAAACAACAGAAGGAAGAACGAGCCATGGACGTCATCTGTGAGCTTGGCTTGGAGAGGTGCCAAGACACAATGATCGGAGGCTCCTTTGTGCGGGGAGTTTCAGGCGGCGAGAGGAAGAGAGTGTGTATCGGCAATGAGATTATAATCAACCCTTCTCTTATGCTCCTCGACGAGCCAACCTCTGGCCTGGATTCAACAACAGCCCTAAGGATAGTTCAAATGTTACATGACATAGCTGAGGCCGGGAAAACAGTGGTAACCACGATCCATCAGCCATCCAGCAGACTTTTTCATAAGTTTGACAAGTTGATCCTTCTGGGGAAGGGTAGTTTGCTGTACTTTGGAAAGGCATCAGAAGCAATGGTTTATTTCTCATCCATAGGATGCTCCCCACTTATTGCCATGAACCCAGCAGAATTCTTGCTAGACCTCGCAAATGGAAACATAAATGATGTTTCTGTGCCATCGGAGTTGGAAGATAAAGTGCAGATGGGAAACTTGGAAACTGAAACAAGAAATGGGAAGCCATCTCCGACAGTTGTGCATGAGTATCTAGTAGAGGCTTACGAGACAAGGGTTGCAGACAAGGCGAAGAAAAAACTCATGGCACCAATCCCCATTGCTGAAGACTTGAAGACAAAGGTATCTTCTCCAAAGAGAGAATGGGGGGCAAGCTGGTGGGAACAATTTTCCATCCTATGCCGGAGAGGCATCAAAGAAAGGCGGCACGATTACCTAAGCTGGTTGAGATTCACTCAAGTTCTCTCCACTGCAATTATCTTGGGTATGCTATGGTGGCACTCAGATGGTACTACTCCAAGAGACCTGCAGGATCAGGCAGGGCTGCTGTTCTTCATTGCTGTCTTCTGGGGTTTTTTTCCTGTTTTCACAGCAATCTTCACGTTCCCTCAAGAAAGAGCCATGCTAAGCAAAGAACGAGCAGTCGACATGTACCGGCTAAGTGCATATTTCATAGCTAGGACAACGAGTGACCTACCGCTTGACCTCTTCCTGCCCGTACTATTCCTTCTCACTGTCTATTTCATGGCAGGCTTGAGACTGAGTGTCGATTCATTCTTCCTAAGCATGCTTACCGTGTTCCTTAGCATCATAGCAGCTCAGGGACTTGGACTGGCTATTGGTGCTACACTGATGGATGTAAAAAAGGCAACAACTTTGGCTTCAGTAACCGTGATGACCTTCATGTTGGCTGGTGGGTTCTTCGTGAAGAGAGTTCCAGTGTTTATATCATGGATCCGTTATGTTTCTTTCAACTACCACACCTACAGGCTTCTTCTCAAGGTTCAATATGACAACACCACTCCTATTATAAATGGAATGAAACTGGACAACGGTTTGAGCGAAGTTGGTATCCTGGTCGCCATGGTTTTTGGGTACCGCCTCTTGGCATACCTTTCTTTACGGCGGATGAAGCTCCAATCTGGAGCTTAA 2193 0.4747 METSSGPARTKSDQLETAMKKSPNRAILNDAEGGSSIARKSSFGKRIASPGHMTHIRKSRSGQLKLELDEVSSGAALSRASSASLGFSFSFAGFTMPPEDIADLRGFSDDDIPEDLEVGTRKTVHMEPTLPIYLKFTDVKYKVVLKGVRTTVEKDILHGITGAVSPREVLALMGPSGCGKTTLLNLLGGRLNESDSGGSITYNDQRYSKSLKRRIGFVTQDDVLFPHLTVRETLTYAALLRLPKTLTKQQKEERAMDVICELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLMLLDEPTSGLDSTTALRIVQMLHDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMVYFSSIGCSPLIAMNPAEFLLDLANGNINDVSVPSELEDKVQMGNLETETRNGKPSPTVVHEYLVEAYETRVADKAKKKLMAPIPIAEDLKTKVSSPKREWGASWWEQFSILCRRGIKERRHDYLSWLRFTQVLSTAIILGMLWWHSDGTTPRDLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLSKERAVDMYRLSAYFIARTTSDLPLDLFLPVLFLLTVYFMAGLRLSVDSFFLSMLTVFLSIIAAQGLGLAIGATLMDVKKATTLASVTVMTFMLAGGFFVKRVPVFISWIRYVSFNYHTYRLLLKVQYDNTTPIINGMKLDNGLSEVGILVAMVFGYRLLAYLSLRRMKLQSGA* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00960 730 ProSitePatterns ABC transporters family signature. 280 294 IPR017871 GO:0005524|GO:0016887
Eupl05g00960 730 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 100 718 - -
Eupl05g00960 730 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 368 IPR027417 -
Eupl05g00960 730 CDD ABCG_EPDR 131 362 - -
Eupl05g00960 730 FunFam ABC transporter G family member 22 144 374 - -
Eupl05g00960 730 Pfam ABC-2 type transporter 475 684 IPR013525 GO:0016020|GO:0140359
Eupl05g00960 730 Gene3D - 134 373 IPR027417 -
Eupl05g00960 730 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 134 380 IPR003439 GO:0005524
Eupl05g00960 730 MobiDBLite consensus disorder prediction 1 34 - -
Eupl05g00960 730 SMART AAA_5 166 357 IPR003593 GO:0016887
Eupl05g00960 730 Pfam ABC-2 type transporter 337 401 IPR043926 GO:0140359
Eupl05g00960 730 Pfam ABC transporter 157 308 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00960 Eupl-Chr5 30946797 30960118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00960 156 394 Calmodulin-binding Proteins AT2G36910 29.435 1.93e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00960 K05681 - nnu:104591010 1162.13