Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00959 ATGGGGAACACGTGCGTAGGACCGAATCTGGGGAATAATGGATTCTTACAAACTGTTTCGGCTGCAATGTGGCGGACCCGGGGAACCGAGGATACACTCCCCCCTCCTAATGGAGACGCAAACGGCAGCAATGCAGGGGCTGCCACTTCTGCTATGGCTACGGCTGACCCTAAAGCATCCGAAGCTCCTCTGCCCGTCCAAAGTACACCACCGGAACCTGTTAAGATCAGCCAAGAGGAAACTAAACCGGTGGAATCTACCAAACCCATTAAGCCAGAGCCAGATATAAAAGAGGAAGAAAGTAAACCATCCGAGTCAGTGAAGGCCAAGAAGCCTCAGCATTTCAAGAGAGTGTCAAGTGTAGGCCCTCAGAAGGATTCTGTGTTACAGAGGAAGACCGAGAACCTGAAGGAAATCTACAGTTTGGGGAGGAAGCTCGGACAAGGGCAATTTGGTACAACTTTTCTCTGTCTGGCGAAAGCAACAGGGAAGGAATATGCTTGCAAATCGATTGCAAAGAGGAAATTAACAACGGAAGAGGATGTAGAGGATGTGAGAAGGGAAATTCAGATAATGCACCACTTGGCAGGCCACCCCAGCGTCATATCAATCACAGGTGCTTACGAGGATGCTGTTGCAGTTCATGTTGTCATGGAATTGTGTGCGGGTGGAGAGCTGTTTGACAGGATCATTCAAAGGGGTCATTATACAGAAAGAAAAGCAGCTGAGCTTGCGAGGATTATAGTTGGTGTAGTGGAAGCCTGCCATTCTTTAGGTGTTATGCATCGGGACCTGAAGCCTGAGAATTTTCTCTTTGTGAACCAGGAAGAGGAGTCACCACTCAAAACCATTGATTTTGGGTTGTCAGTATTTTTTAGGCCAGGGGAAACATTCACTGATGTGGTTGGGAGTCCCTATTATGTTGCACCAGAAGTGTTGCGCAAGCATTATGGTCCAGAGTGTGATGTTTGGAGTGCTGGGGTAATCATATATATTTTACTAAGTGGAGTCCCTCCATTTTGGGATGAAACCGAGCAGGGGATATTTCAACAGGTTTTAAAAGGTGAGCTTGACTTTATATCAGAACCATGGCCTAGTATCTCTGATAGTGCAAAGGATTTGGTGAGGAAAATGCTTGTAAGAGACCCACTAAAGCGACTGACTGCCCATGAAGTTCTCTGTCACCCTTGGGTTCGGGTTGATGGTGTAGCTCCTGATAAGCCTCTTGACTCTGCAGTTCTGACTCGCTTGAAGCAATTCTCAGCCATGAACAAGCTCAAGAGAATGGCCATCAGAGTCATTGCTGAAAGCCTGTCTGAAGAGGAAATTGCTGGCTTAAAAGAAATGTTCAAGATGATTGACACAGACAATAGTGGACATATCACCTTCGAAGAACTCAAGGCTGGTTTGGAAAGAGTTGGTGCTAATCTCAAAGAATCTGAAATCAATGCATTAATGCAAGCTGCGGATGTTGACAACAGTGGAACCATAGACTATGGGGAGTTCTTAGCAGCGACTCTCCATCTAAACAAAATTGAGAGGGAGGATCATTTGTTTGCTGCTTTCTCATACTTTGACAAAGACGGAAGTGGGTACATCACCCAAGATGAGCTCCAACAGGTATGTAAGGAGTTTGGTATGGAAGACATCCGTCTGGAAGAAACGATAGAAGAAGTGGATCAGGACAATGACGGGCTCATAGATTACAGTGAATTTGTGGCCATGATGCAAGATGGAGGTTTTGACATGAAGGGTCGGCAAAGTAACATCAGCATTGGGTTCATGGAGGCCTTTAAGCTTGGTTGA 1806 0.4612 MGNTCVGPNLGNNGFLQTVSAAMWRTRGTEDTLPPPNGDANGSNAGAATSAMATADPKASEAPLPVQSTPPEPVKISQEETKPVESTKPIKPEPDIKEEESKPSESVKAKKPQHFKRVSSVGPQKDSVLQRKTENLKEIYSLGRKLGQGQFGTTFLCLAKATGKEYACKSIAKRKLTTEEDVEDVRREIQIMHHLAGHPSVISITGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAAELARIIVGVVEACHSLGVMHRDLKPENFLFVNQEEESPLKTIDFGLSVFFRPGETFTDVVGSPYYVAPEVLRKHYGPECDVWSAGVIIYILLSGVPPFWDETEQGIFQQVLKGELDFISEPWPSISDSAKDLVRKMLVRDPLKRLTAHEVLCHPWVRVDGVAPDKPLDSAVLTRLKQFSAMNKLKRMAIRVIAESLSEEEIAGLKEMFKMIDTDNSGHITFEELKAGLERVGANLKESEINALMQAADVDNSGTIDYGEFLAATLHLNKIEREDHLFAAFSYFDKDGSGYITQDELQQVCKEFGMEDIRLEETIEEVDQDNDGLIDYSEFVAMMQDGGFDMKGRQSNISIGFMEAFKLG* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00959 601 Pfam Protein kinase domain 140 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g00959 601 Gene3D - 423 580 - -
Eupl05g00959 601 Gene3D Phosphorylase Kinase; domain 1 142 225 - -
Eupl05g00959 601 MobiDBLite consensus disorder prediction 78 112 - -
Eupl05g00959 601 MobiDBLite consensus disorder prediction 28 124 - -
Eupl05g00959 601 ProSitePatterns EF-hand calcium-binding domain. 454 466 IPR018247 -
Eupl05g00959 601 FunFam Calcium-dependent protein kinase SK5 226 410 - -
Eupl05g00959 601 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Eupl05g00959 601 ProSiteProfiles EF-hand calcium-binding domain profile. 551 582 IPR002048 GO:0005509
Eupl05g00959 601 Gene3D Transferase(Phosphotransferase) domain 1 226 422 - -
Eupl05g00959 601 ProSitePatterns EF-hand calcium-binding domain. 490 502 IPR018247 -
Eupl05g00959 601 ProSiteProfiles Protein kinase domain profile. 140 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g00959 601 CDD STKc_CAMK 140 397 - -
Eupl05g00959 601 ProSiteProfiles EF-hand calcium-binding domain profile. 513 548 IPR002048 GO:0005509
Eupl05g00959 601 Pfam EF-hand domain pair 516 577 IPR002048 GO:0005509
Eupl05g00959 601 Pfam EF-hand domain pair 446 506 IPR002048 GO:0005509
Eupl05g00959 601 ProSitePatterns Protein kinases ATP-binding region signature. 146 173 IPR017441 GO:0005524
Eupl05g00959 601 ProSitePatterns EF-hand calcium-binding domain. 560 572 IPR018247 -
Eupl05g00959 601 ProSitePatterns EF-hand calcium-binding domain. 526 538 IPR018247 -
Eupl05g00959 601 SUPERFAMILY EF-hand 438 577 IPR011992 -
Eupl05g00959 601 ProSiteProfiles EF-hand calcium-binding domain profile. 477 512 IPR002048 GO:0005509
Eupl05g00959 601 FunFam Calcium-dependent protein kinase 1 406 580 - -
Eupl05g00959 601 CDD EFh 517 577 IPR002048 GO:0005509
Eupl05g00959 601 ProSiteProfiles EF-hand calcium-binding domain profile. 441 476 IPR002048 GO:0005509
Eupl05g00959 601 SMART efh_1 481 509 IPR002048 GO:0005509
Eupl05g00959 601 SMART efh_1 445 473 IPR002048 GO:0005509
Eupl05g00959 601 SMART efh_1 517 545 IPR002048 GO:0005509
Eupl05g00959 601 SMART efh_1 551 579 IPR002048 GO:0005509
Eupl05g00959 601 PANTHER SERINE/THREONINE-PROTEIN KINASE 125 572 - -
Eupl05g00959 601 SUPERFAMILY Protein kinase-like (PK-like) 140 399 IPR011009 -
Eupl05g00959 601 SMART serkin_6 140 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g00959 601 FunFam Calcium-dependent protein kinase 1 142 225 - -
Eupl05g00959 601 MobiDBLite consensus disorder prediction 36 50 - -
Eupl05g00959 601 CDD EFh 446 505 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00959 Eupl-Chr5 30926375 30938871 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00959 1 594 EF-hand Containing Proteins AT3G10660 68.397 0.0 890
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Eupl05g00959 Pkinase 4.4e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00959 K13412 - ming:122081142 960.288