Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00955 ATGGGGCCTTGGTCTTGGTTGATGCTGCTGAAGGGGTCCACAAACCAGACTCATGCGGTCCTACGTCAGGCGTGGATAGAGAAGCTCACGCCTTGTCTGGTTCTCAACAAGATCAATCGGTTGATCTCGGAACTGAAACTAAGTCCAATGGAAGCTTATAACCGATTGCAGAGGATTGTTCATGAGGTTAATGGTATTGTGAGTGCGTACAAGTCAGAAAAGTATCTCTCAGATGTTGATTCGATACTTACAGGGCCTGCTGGTGAGATGGGTGATGAGAATCTCGAGTTTGTGGAGGATGATGAGGAAGATACTTTTCAACCCCAGAAAGGAAATGTGGGTTTTGTTTGTGCTTTGGATGGGTGGGGTTTTTGTATTAACGAGTTCGCTGATTTCTATGCTTCAAAGCTTGGGGCGAGTGCCGCTGTGTTGCAGAAGGCTTTGTGGGGCCCTCATTATTTTAACCCAAAGACCAAGATGATTGTTGGAAAGAAGGGAATTGGTGCAGGGAGCAAGGCTCGGCCCATTTTTGTGCAGTTTGTTCTTGAGCCGCTCTGGCAAGTTTATCAGGCAGCTCTTGAATCTGAGGGGGATAAGGGGGTGTTAGAGAAAGTCATCAAGTCATTCAGTTTATCTGTACCTGCTCGCGAACTTCAGAACAAGGATCCAAAAGTTGTGCTTCAAGCTGTCATGAGCCGTTGGCTTCCTTTGTCGGATACAATCTTGTCAATGGTGGTTGAGTGTATGCCTGATCCTGTTGGGGCCCAGTCTATTCGAATATCGCAGTTGCTTCCAAAGAGAGAGATGGTGGATAATGGGGTTAGCTCCAACGTGCTTGCAGAGGCTGAGCATGTGAGGAAATCTGTTGAGAATTGTGATTCTAGCCCTGAAGCACCGTGTGTTGCTTTTGTATCTAAGATATTTGCTGTCCCATTGAAAATGCTCCCACAGAGGGGTCCCAATGGGGAAGTTGTGAACAATTCTGTGGAAGAAGGTGGGGTTGGTGAATCAGATGAGTGCTTCCTTGCATTTGCAAGAATTTTTAGCGGTGTTCTTTCCTTAGGGGAGGGAATCTTTGTGCTTTCTGCTTTATACGATCCACTTAAAGGAGAGTCAACGCAGAAGCATGTGCAGGAAGCCAAGTTGAATTCCTTGTATCTGATGATGGGACAAGGTTTGAAACCAGTGGCCTCTGCCAAGGCGGGGAATGTTGTTGCTATACGAGGCCTCGGTCAGCATTTCTTGAAGAGCACAACCCTCTCATCCACAAGAAACTGTTGGCCTTTCTCGAGTATGGTGTTCCAAGTTGCGCCTACTCTAAGAGTGGCTATTGAACCATCTGATCCAACAGATATGGGTGCACTCATGAGGGGCTTGAGGCTTCTGAACCGGGCTGACCCATTTGTTGAGGTTACTGTTTCTGCAAGAGGGGAGCAGGTGCTTGTGGCTGCGGGAGAGGTTCATCTTGAGAGATGCATAAAAGATCTGAAAGAGAGATTTGCAAAGGTAATCTTGGAAGTCTCGCCGCCCCTTGTCTCCTATAAAGAGACCATTGAAGGAGAGGGATCTAATCTACTAGAGAATCTGAAGGTGTTGACAGGGAGCTCGGATTATGTTGAGAAGATAACTCCTAATGGAAGATGTGTCATTCGAGTGCAAGTCATGAAGCTTCCACCTGCACTAACAAAGGTGCTTGATGAAAGTTCTGATCTACTTGGAGATATTATAGAAGGCAAACCAAGGCAGAGAAATAAAAGCTCTGAAACACGGAGAGAAAAGAGTACTCTTGAAGATGAAAATCCAATTAAAGCACTTAATAAACGCATAATAGATGCTATAGAGATTGAACTTGAGTCTGGGTGCAAAGAAATCGATAAGGAAAGGGCTGACAAGTATAAGAGTTTGTGGCTTGAGTTTCTCCAGAGGATCTGGGTGCTTGGGCCTAGGCAGGTTGGTCCTAATATTCTCCTTGTTCCACATTCCAAAGCTAGGGATAGTGATTCCACAATTATTGTACGAGGTTCACCTCATGTGTCTGAAAGATTGGGGTTTGTGGATGTCTCTGGTGCAAAGACTAGATATGAAGATACAGTTGCTGAGGAATCTTTAGGAGCAAACCAATCATTGTACATGGAGGCAGAGGGTCTTGAGAGCAGTGTGATATCTGGGTTCCAACTAGCTACAGCAGCTGGCCCATTGTGTGATGAACCCATGTGGGGTTTGGCATTTCTTGTTGAAGCTTATATAACTCGATTGGAGGGCCAGCCTGATGAATCTGAATCTTCTAGTCAACAATCAGATCAATATGGCATCTTCACGGGACAGGCTTATGACAGCTGTAAAGGAAGCGTGTAG 2355 0.4577 MGPWSWLMLLKGSTNQTHAVLRQAWIEKLTPCLVLNKINRLISELKLSPMEAYNRLQRIVHEVNGIVSAYKSEKYLSDVDSILTGPAGEMGDENLEFVEDDEEDTFQPQKGNVGFVCALDGWGFCINEFADFYASKLGASAAVLQKALWGPHYFNPKTKMIVGKKGIGAGSKARPIFVQFVLEPLWQVYQAALESEGDKGVLEKVIKSFSLSVPARELQNKDPKVVLQAVMSRWLPLSDTILSMVVECMPDPVGAQSIRISQLLPKREMVDNGVSSNVLAEAEHVRKSVENCDSSPEAPCVAFVSKIFAVPLKMLPQRGPNGEVVNNSVEEGGVGESDECFLAFARIFSGVLSLGEGIFVLSALYDPLKGESTQKHVQEAKLNSLYLMMGQGLKPVASAKAGNVVAIRGLGQHFLKSTTLSSTRNCWPFSSMVFQVAPTLRVAIEPSDPTDMGALMRGLRLLNRADPFVEVTVSARGEQVLVAAGEVHLERCIKDLKERFAKVILEVSPPLVSYKETIEGEGSNLLENLKVLTGSSDYVEKITPNGRCVIRVQVMKLPPALTKVLDESSDLLGDIIEGKPRQRNKSSETRREKSTLEDENPIKALNKRIIDAIEIELESGCKEIDKERADKYKSLWLEFLQRIWVLGPRQVGPNILLVPHSKARDSDSTIIVRGSPHVSERLGFVDVSGAKTRYEDTVAEESLGANQSLYMEAEGLESSVISGFQLATAAGPLCDEPMWGLAFLVEAYITRLEGQPDESESSSQQSDQYGIFTGQAYDSCKGSV* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00955 784 Gene3D Translation factors 252 435 - -
Eupl05g00955 784 Gene3D Yeast translation eEF2 (G' domain) 126 235 - -
Eupl05g00955 784 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 12 753 - -
Eupl05g00955 784 Gene3D Elongation Factor G (Translational Gtpase), domain 3 437 513 - -
Eupl05g00955 784 MobiDBLite consensus disorder prediction 576 598 - -
Eupl05g00955 784 SUPERFAMILY Ribosomal protein S5 domain 2-like 512 750 IPR020568 -
Eupl05g00955 784 CDD EF2_II 299 423 - -
Eupl05g00955 784 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 250 IPR027417 -
Eupl05g00955 784 FunFam Translation elongation factor 2 437 513 - -
Eupl05g00955 784 SUPERFAMILY Translation proteins 291 432 IPR009000 -
Eupl05g00955 784 CDD EF2_snRNP_III 438 509 - -
Eupl05g00955 784 Pfam Elongation factor Tu GTP binding domain 11 249 IPR000795 GO:0003924|GO:0005525
Eupl05g00955 784 Gene3D - 533 783 IPR014721 -
Eupl05g00955 784 FunFam Elongation factor like GTPase 1 126 235 - -
Eupl05g00955 784 SUPERFAMILY EF-G C-terminal domain-like 435 510 IPR035647 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00955 Eupl-Chr5 30900537 30902891 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00955 10 784 Eukaryotic Initiation Factors Gene Family AT3G22980 64.789 0.0 1004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00955 K14536 - nnu:104599712 1186.79