Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00954 ATGTACTTCTGTGAGTTGAACACCCCGACTGAATACTTGGGCCCCATGTATGCTGTGCTTGCTAGGCGGCGGGCTCGAGTCTTGAAGGAAGAGATGCAGGAAGGCTCTCCATTGTTCACTGTGCATGCATATGTGCCGGTTGCTGAAAGCTTTGGGTTCGCAGACGAGCTTAGGAGATGGACATCGGGGGCTTCAAGCACGCTGCTTGTACTTAGCCATTGGGAAGCACTTCCGGAAGATCCTTTCTTTGTACCCAAAACAGAAGAGGAGATTGAGGAATTCGGAGATGGGTCAAGTGTTCTGCCAACCACAGCAAGGAAGCTTATTGATGCTGTGAGGCGGCGGAAAGGCCTTCCAGTGGAGGAAAAAGTTGTCCAGCATGCTACGAAGCAGAGGACCCTAGCCTGTAAAGTGTGA 417 0.5156 MYFCELNTPTEYLGPMYAVLARRRARVLKEEMQEGSPLFTVHAYVPVAESFGFADELRRWTSGASSTLLVLSHWEALPEDPFFVPKTEEEIEEFGDGSSVLPTTARKLIDAVRRRKGLPVEEKVVQHATKQRTLACKV* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00954 138 Gene3D - 1 131 - -
Eupl05g00954 138 CDD eEF2_snRNP_like_C 1 78 - -
Eupl05g00954 138 Pfam Elongation factor G C-terminus 1 81 IPR000640 -
Eupl05g00954 138 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 1 136 - -
Eupl05g00954 138 FunFam Elongation factor like GTPase 1 1 130 - -
Eupl05g00954 138 SUPERFAMILY EF-G C-terminal domain-like 1 97 IPR035647 -
Eupl05g00954 138 SMART EFG_C_a 1 85 IPR000640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00954 Eupl-Chr5 30900080 30900496 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00954 1 138 Eukaryotic Initiation Factors Gene Family AT3G22980 85.507 3.78e-77 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00954 K14536 - mof:131149240 258.07