Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00888 ATGGCTGAAGAAAGAATCTTCCCTTCAACCCTTTTCGTTCTGTTTATCGTTTTTCTTTCAATCCCTTATACAGAACAGCGACAATCCTCTCAAGCTCAGACCCTTTTGAGAATCCAACGGCTTTTGAACTTTCCGGCTGTTTTAAGCAGTTGGAATAACTACACAGACTTCTGTAACACCGAACCCAGTTCGTTTTTAACTGTTGTTTGTTACGAAGAGATTATAACCCAGCTGCATATTATCGGGAACAAGGGGACTCTGTCATTGCCTCGGAATTTCTCTGTCGATTCGTTCTTCACGACACTCGTTAGTCTCCCGAGCTTGAAAGTCCTTTCGTTGGTTTCTCTCGGTTTATGGGGCGCACTACCCGGTAAAATAGCTCGTTTATCTTCGCTGGAAATACTTAACATAAGTTCAAATTTCTTTTATGGTGTCATTCCTCAAGAGGTTTCATCTCTGAGGATCCTTCAAACACTGATACTAGATAACAACTTGTTCACTGGTCGCGTTCCTGATTGGCTGAGTGAACTTCCAGTTTTGTCTGTCTTGAGTTTGAAGAACAATTCGTTTAATGGGTCTCTGCCTAACTCATTGGGAACTTTGGAGACTCTCAGAGTTCTAGCACTGTCAATGAACAAGTTGTCTGGAGAAGTGCCTGATCTTAGCAGTTTGACGAACCTTCAAGTTCTTGACTTGGAAAATAATCATTTAGGACCGCAGTTTCCCAGTTTGGGGCGCAAGTTGGTTATTCTTGAACTGAGGAAGAACAGGTTTAGCTCTGCCATTCCTGCCGAAGTAAGCTCCTATTATCAGCTTGAACGGCTAGATATTTCTTTTAACCGATTTGTGGGGCCGTTTCCGCCATTATTGTTATCTCTGCCTTCGATTACTTATCTGAATATCGCAGGAAACAGATTCACCGGAATGCTTTTCGAAAATATGTCCTGCAATGCTGAACTTGATTTTGTGGACTTGTCCTCGAATCTTTTGATTGGGAGCATGCCTACCTGTCTGCAGTCGGATTCTAAGAACAGGGTTGTCCTGTATGCTAGAAATTGTCTAACAACTGGAGATCAAAAGCAGCATCCATATTTCTTTTGCCGAAATGAAGCTTTAGCTGTGGGAATATTACCTCACAGGCAACAAAAACGAAAGACTGCTAGAGCGGTTCTTGCATCAAGTATAGTGGGGGGGATTGTTGGAGGAATTGCACTTGTTGGTCTGATTTTCTTGGCTGTTAGAAGATTAAATACCAAGAAGACGTTGGAAAAACCTCCGGCAAGATTAATAACGGAGAATGTGTCGACTGGGTACACCTCAAAGCTGCTTTCGGATGCAAGGTATATATCTCAAACGATGAGGCTAGGTGCGCTTGGTCTTCCATCTTATCGAACATTTGCTTTGGAGGAGCTAGAAGAGGCTACGAATAACTTTGATACATCAACTTTCATGGGCGAAGGTTCTCATGGCCAGATGTACAGAGGTAGGCTGAATGATGGTTCCGTAGTCGCCATAAGATGCTTGAAATTGAAAAAAAGGCACAGCACTCAGAACTTTATGCACCATATCGAACTGATTTCGAAACTCAGACATCGTCATTTGGTCAGTGCTCTTGGACACTGCTTCGAGTGTTACCTGGATGATTCAAGCGTCAGCAGAATATTTCTTGTCTTTGAATATGTACCAAATGGGACGCTTAGGGGCCACATCTCTGTGGGAGCTGCAGGACAATCACTTAACTGGACACAAAGGATAGCAGCTAGCATTGGCATAGCAAAGGGCATCCAATATCTGCATACCGGGATTGTACCTGGTGTATTCTCAAATAATCTGAAAATAACAGATGTTCTGTTGGATCAAAACCTCGTTGCGAAAATCAGCAGCTATAACCTTCCTTTATTAGCAGAGAATATGAGAAAGGTGGGTACGGGGGTTTCTTCTAGTGGATCAAAAGAACTTAGTGTTCCTGGAAGGACAAACCTCGAGGAGAAGATCGATGTTTATGACTTTGGAGTAATCTTACTAGAAATCGTTGTAGGAAGGCCGATCATGTCCCAAAATGAAGTGGATGCTGTAAAAGATCAGTTGCAAGTAGGCATCATGGCTAGCGATGTGGCTCAAAGGAGCATTGTTGATCCGGTGGTTCGCAAGGCGTGCTCAGATGAATCATTGAAGACAGTGATGGAGATCTGCAACAGGTGCCTATCGAAGGAGCCAACAGAGAGACCTTCTGTTGAGGACGTGCTGTGGAACTTGCAGTTTGCAGCCCAGATTCAGGACGAATGGAGGGGCGACTCCCAGAGCAGCGAAGGGTCGCCAGTTTCACCTTCTCAACCCCCACCCCAACAGCGCACCTTACAGTAG 2364 0.4408 MAEERIFPSTLFVLFIVFLSIPYTEQRQSSQAQTLLRIQRLLNFPAVLSSWNNYTDFCNTEPSSFLTVVCYEEIITQLHIIGNKGTLSLPRNFSVDSFFTTLVSLPSLKVLSLVSLGLWGALPGKIARLSSLEILNISSNFFYGVIPQEVSSLRILQTLILDNNLFTGRVPDWLSELPVLSVLSLKNNSFNGSLPNSLGTLETLRVLALSMNKLSGEVPDLSSLTNLQVLDLENNHLGPQFPSLGRKLVILELRKNRFSSAIPAEVSSYYQLERLDISFNRFVGPFPPLLLSLPSITYLNIAGNRFTGMLFENMSCNAELDFVDLSSNLLIGSMPTCLQSDSKNRVVLYARNCLTTGDQKQHPYFFCRNEALAVGILPHRQQKRKTARAVLASSIVGGIVGGIALVGLIFLAVRRLNTKKTLEKPPARLITENVSTGYTSKLLSDARYISQTMRLGALGLPSYRTFALEELEEATNNFDTSTFMGEGSHGQMYRGRLNDGSVVAIRCLKLKKRHSTQNFMHHIELISKLRHRHLVSALGHCFECYLDDSSVSRIFLVFEYVPNGTLRGHISVGAAGQSLNWTQRIAASIGIAKGIQYLHTGIVPGVFSNNLKITDVLLDQNLVAKISSYNLPLLAENMRKVGTGVSSSGSKELSVPGRTNLEEKIDVYDFGVILLEIVVGRPIMSQNEVDAVKDQLQVGIMASDVAQRSIVDPVVRKACSDESLKTVMEICNRCLSKEPTERPSVEDVLWNLQFAAQIQDEWRGDSQSSEGSPVSPSQPPPQQRTLQ* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00888 787 MobiDBLite consensus disorder prediction 761 787 - -
Eupl05g00888 787 Pfam Protein kinase domain 481 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g00888 787 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 561 768 - -
Eupl05g00888 787 ProSiteProfiles Protein kinase domain profile. 478 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g00888 787 FunFam Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 247 372 - -
Eupl05g00888 787 SUPERFAMILY Protein kinase-like (PK-like) 460 754 IPR011009 -
Eupl05g00888 787 ProSiteProfiles Leucine-rich repeat profile. 203 225 IPR001611 GO:0005515
Eupl05g00888 787 Gene3D Ribonuclease Inhibitor 245 362 IPR032675 -
Eupl05g00888 787 PANTHER UNNAMED PRODUCT 86 681 - -
Eupl05g00888 787 SUPERFAMILY RNI-like 87 355 - -
Eupl05g00888 787 Gene3D Phosphorylase Kinase; domain 1 451 560 - -
Eupl05g00888 787 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 451 560 - -
Eupl05g00888 787 Gene3D Transferase(Phosphotransferase) domain 1 561 770 - -
Eupl05g00888 787 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 28 246 - -
Eupl05g00888 787 Gene3D Ribonuclease Inhibitor 28 244 IPR032675 -
Eupl05g00888 787 Pfam Leucine Rich Repeat 226 242 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00888 Eupl-Chr5 29956331 29969270 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00888 44 783 Miscellaneous Gene Families AT3G03770 64.343 0.0 936
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Eupl05g00888 Pkinase 1.7e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00888 - - nnu:104604140 1144.03