Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00860 ATGGCTGAGGCTCCGCTCGCAGATGGAGCAACCACAATGGAACCTGAGCAAATGAAAGAAAAAGAAAGAGAAAGCAATAACCTGGTCTTGCCAGATGACGGGTACGGGTGGAAGAAATATGGTCAAAAGTTCATTAAAAATATTCATAAAACCAGAAGATATTTCAAGTGCCGAGGGACCAACTGCAGAGCCAAGAAGAAAGCGGATTGGTCTGTATCAGAACCTAGTAATATCCGAGTTGTTTACGAAGGGGTGCACAACCATCCCAGCTTGGTCCCCGATTCTGGTTCTTCGCAACAACAAGCTTCAAGTTCAACGGCTAACCAGTATAACTTGGTCACTCAAGTTTTTGGAACCCAAATAAGCAACCCTTTTTAG 378 0.4418 MAEAPLADGATTMEPEQMKEKERESNNLVLPDDGYGWKKYGQKFIKNIHKTRRYFKCRGTNCRAKKKADWSVSEPSNIRVVYEGVHNHPSLVPDSGSSQQQASSSTANQYNLVTQVFGTQISNPF* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00860 125 MobiDBLite consensus disorder prediction 91 106 - -
Eupl05g00860 125 ProSiteProfiles WRKY domain profile. 26 91 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl05g00860 125 MobiDBLite consensus disorder prediction 87 106 - -
Eupl05g00860 125 SMART WRKY_cls 31 90 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl05g00860 125 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 30 107 IPR044810 GO:0003700
Eupl05g00860 125 MobiDBLite consensus disorder prediction 14 28 - -
Eupl05g00860 125 MobiDBLite consensus disorder prediction 1 28 - -
Eupl05g00860 125 Pfam WRKY DNA -binding domain 32 89 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl05g00860 125 Gene3D WRKY domain 17 90 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl05g00860 125 SUPERFAMILY WRKY DNA-binding domain 27 89 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00860 Eupl-Chr5 29526479 29529961 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00860 32 108 WRKY Transcription Factor Family AT3G62340 43.750 5.37e-17 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl05g00860 WRKY 8e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00860 - - ming:122062095 140.198