Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00855 ATGCGAGAGCTGCGAAGTGGAGCTCGACAAGCTCGGTTAAAATCCAAACAACTTGATGATCCTCAGCCTTCTCCCCAACCATTCGACCAAGCAGAAAATTGGATCCTGCCTACTCAAAACAGAACTGGAAGGAGAGTAGGTGCTGGAAGAGGAAGGGGTTGTAATGCCACAGCAGTAGCAAAAAGGCGTTCAACGGTACCAGCTAGGCCAACTGCTGCTGGTAGAGGCAGGGGTGTTAGGCTGATAGACTTAGAGCCAAAGCTTCCTTGTGAAGTTCTCCAGGAAGCTGCTGTTGAAGGTGCAGAAGAACTGGCTTTCAATCGAGTGGAGGGGGTGGCTGGTAAAGACTTAGTGATGGCGGGGGGGAGTGCAGAGAAATTGATCGGAGTTGAAGAAGAAGCAAGCCCAGCAGTGCCTGAAAAGGTACAAGTAGGCAATTCTCCTGTATATATGATAGAGAGGAAGTTGGGTAAAGGTGGTTTTGGTCAAGTCTTTGTTGGCAGAAGGGTAACTGGTGGTACAGAGCGCACTGGACCAGATGCCGTTGAGGTGGCATTGAAGCTTGAACACCGTAGTAGTAAAGGTTGCAATTATGGCCCTCCTTACGAGTGGCAAGTCTACAACACTCTCAATGGATGTTATGGTCTTCCGTGGGTTCACTACAAGGGACGCCAAGGAGATTATTACATTCTGGTCATGGACATGCTTGGGCCCAGTCTTTGGGATGTCTGGAATTCTGTTGGACAGGCGATGTCGCCCAATATGGTGGCTTGTATCGCCGTGGAGGCAATATCGATTCTTGAGAAGCTTCACTTGAAGGGGTTTGTTCACGGAGATGTGAAGCCAGAAAATTTTTTACTTGGTCAACCTGGATCTGCTGATGAGAAGAAGCTATTTCTCATTGACCTTGGTTTGGCATCTAGATGGAAGGATGCATCATCCGGTCAACATGTTGACTATGACCAGAGGCCCGACATCTTCAGGGGAACAATAAGATATGCTAGTGTACACGCGCATTTAGGTCGAACTGGAAGCAGGAGGGATGACCTTGAGTCACTAGCATACACATTGATATTTCTCATCAAAGGAAGGTTACCATGGCAAGGCTATCAGGGGGACAACAAGAGTTTTCTTGTTTGTAAGAAAAAGATGGTTACTTCTCCAGAGTTGCTGGGTTGTTTCTGCCCTCCCCCATTTAAGAAGTTCCTTGAGATCGTGGCAAATATGAAATTTGATGAAGAACCGAATTATCCCAAGCTTATTTCCCTTTTTGACAGCTTGATTGAGCCATGCACGCCCCTGAGACCGATTCGAATTGATGGAGCTCTAAAGGTTGGACAGAAGCGGGGAAGGTTGCTTGTAAATCTGGAAGAAAATGAGCAACCTAAGAAAAAAGTACGATTAGGCAGTCCAGCTACCCAGTGGATTTCAGTTTACAATGCACGTCGTCCCATGAAGCAGCGATACCACTATAATGTAGCAGATTCAAGGCTTCATCAGCATGTAGATAAGGGTAAGGAAGATGGTTTATACATCAGTTGTGTGGCTTCCGGAGCAAATCTTTGGGCCCTCATCATGGACGCAGGAACAGGTTTCTGTTCCCAGGTTTATGAACTGTCGGCTGTCTTTCTGCATAAGGATTGGATAATGGAACAGTGGGAAAAAAATTACTACATTAGTTCAATTGCTGGTGCAGCCAATGGGAGTTCCTTGGTCGTTATGTCAAAAGGAACCCCTTACACCCAACAATCCTACAAAGTGAGTGAATCATTTCCCTTCAAATGGATTAACAAAAAATGGAAAGAAGGTTTCCACGTCACTTCCATGACTACTGCTGGCAGCCGCTGGGGTGTGGTAATGTCTAGAAACTCTGGTTTTTCTGGCCAGGCTGTGGAACTTGATTTTCTATATCCAAGCGAAGGAATACACCGGCGATGGGAGAGTGGTTACAGGATTACCTCTGCAGCTGCCACCCCTGATCAAGCCGCCTTCATATTGAGTATACCAAAACGTAAAATGATGGATGAAACACAAGAAACTCTACGTACTTCTGCCTTCCCAAGCACCCATGTGAAGGAAAAATGGTCCAAAAATCTCTACATTGCATCGATTTGTTATGGTCGATCCGTTTGTTAA 2136 0.4616 MRELRSGARQARLKSKQLDDPQPSPQPFDQAENWILPTQNRTGRRVGAGRGRGCNATAVAKRRSTVPARPTAAGRGRGVRLIDLEPKLPCEVLQEAAVEGAEELAFNRVEGVAGKDLVMAGGSAEKLIGVEEEASPAVPEKVQVGNSPVYMIERKLGKGGFGQVFVGRRVTGGTERTGPDAVEVALKLEHRSSKGCNYGPPYEWQVYNTLNGCYGLPWVHYKGRQGDYYILVMDMLGPSLWDVWNSVGQAMSPNMVACIAVEAISILEKLHLKGFVHGDVKPENFLLGQPGSADEKKLFLIDLGLASRWKDASSGQHVDYDQRPDIFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVCKKKMVTSPELLGCFCPPPFKKFLEIVANMKFDEEPNYPKLISLFDSLIEPCTPLRPIRIDGALKVGQKRGRLLVNLEENEQPKKKVRLGSPATQWISVYNARRPMKQRYHYNVADSRLHQHVDKGKEDGLYISCVASGANLWALIMDAGTGFCSQVYELSAVFLHKDWIMEQWEKNYYISSIAGAANGSSLVVMSKGTPYTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGSRWGVVMSRNSGFSGQAVELDFLYPSEGIHRRWESGYRITSAAATPDQAAFILSIPKRKMMDETQETLRTSAFPSTHVKEKWSKNLYIASICYGRSVC* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00855 711 FunFam Casein kinase 1-like protein 123 470 - -
Eupl05g00855 711 MobiDBLite consensus disorder prediction 1 52 - -
Eupl05g00855 711 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Eupl05g00855 711 PANTHER CASEIN KINASE-RELATED 150 681 - -
Eupl05g00855 711 Pfam Protein kinase domain 150 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g00855 711 ProSiteProfiles Protein kinase domain profile. 150 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g00855 711 SMART serkin_6 150 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g00855 711 MobiDBLite consensus disorder prediction 17 40 - -
Eupl05g00855 711 ProSitePatterns Protein kinases ATP-binding region signature. 156 187 IPR017441 GO:0005524
Eupl05g00855 711 CDD STKc_CK1 150 424 - -
Eupl05g00855 711 Gene3D Transferase(Phosphotransferase) domain 1 126 467 - -
Eupl05g00855 711 MobiDBLite consensus disorder prediction 1 16 - -
Eupl05g00855 711 SUPERFAMILY Protein kinase-like (PK-like) 150 437 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00855 Eupl-Chr5 29449022 29458635 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00855 132 330 EF-hand Containing Proteins AT4G04700 24.272 4.25e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Eupl05g00855 Pkinase 3.7e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00855 - - ming:122091782 1263.06