Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00826 ATGGCTTATAGGACACCACGAGGAAAGGATTCATCGATAATAGCCAAGTCCAACGACATGGTAGCCTCGGGCCAGCTAAAGGAAATAGCAATGCCAAGAGACATATGCCGAGACAACTCAGGTGGTACCGAGATCGTAGAGGGTTTTGGAGGACTCCAGAACATCTCTGCATCAGTAGCCATGGCGGTCGTCGCTCAACCTCAACCGGAAGTGAAGCTCTTCAACAGATGGTCCTTCGAAGATATCGAGGTTGGTGACATATCTTTGGCTGATTACATTGGGGTGAATGCAAACAAGCATGCGACATATGTCCCACACACAGCTGGGAGGTACTCTGTCAAGAGGTTCAGGAAAGCCCAATGCCCCATTGTGGAGAGACTGACCAATTCCCTAATGATGCACGGGCGCAACAACGGGAAGAAGTTGCTGGCTGTCCGTATTATCAAGCACGCCATGGAGATCATCCATCTCCTTACTGACGCTAACCCCATTCAAATTATTGTAGATGCTGTCATCAACAGTGGACCAAGAGAAGATGCCACTCGAATTGGTTCAGCTGGTGTTGTGAGGCGTCAGGCTGTTGATATCTCTCCTCTGAGGCGTGTCAACCAAGCAATATATCTTATTACGACAGGTGCTCGTGAAAGTGCTTTCAGGAATATCAAGACTGTAGCCGAGTGCCTAGCAGATGAGCTCATAAATGCTGCTAAGGGTTCTTCCAACAGTTATGCCATTAAGAAAAAAGATGAGATTGAGCGAGTTGCCAAGGCCAACCGTTGA 780 0.4821 MAYRTPRGKDSSIIAKSNDMVASGQLKEIAMPRDICRDNSGGTEIVEGFGGLQNISASVAMAVVAQPQPEVKLFNRWSFEDIEVGDISLADYIGVNANKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLLAVRIIKHAMEIIHLLTDANPIQIIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTVAECLADELINAAKGSSNSYAIKKKDEIERVAKANR* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00826 259 FunFam 40S ribosomal protein S5 55 259 - -
Eupl05g00826 259 NCBIfam 30S ribosomal protein S7 70 259 IPR005716 GO:0003735|GO:0006412|GO:0015935
Eupl05g00826 259 CDD uS7_Eukaryote 72 259 IPR005716 GO:0003735|GO:0006412|GO:0015935
Eupl05g00826 259 SUPERFAMILY Ribosomal protein S7 72 259 IPR036823 -
Eupl05g00826 259 ProSitePatterns Ribosomal protein S7 signature. 125 151 IPR020606 GO:0003723|GO:0003735|GO:0006412
Eupl05g00826 259 Pfam Ribosomal protein S7p/S5e 113 259 IPR023798 -
Eupl05g00826 259 Gene3D Ribosomal protein S7 domain 53 259 IPR036823 -
Eupl05g00826 259 PANTHER RIBOSOMAL PROTEIN S7 66 259 IPR000235 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00826 Eupl-Chr5 28940614 28949314 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00826 56 259 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 84.314 1.78e-130 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00826 K02989 - nnu:104611130 366.311