Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00812 ATGGCCGCTACTGCGACGTACCCACCTCCACCGCCATATTACAGGCTTTACAAGGATTTCCTCCAAAACCCTAAATCGGCTCCAGAGCCTCCCCCTCCAATCCAAGGGGCCTACCTCCTCTACGGCGGGAGCTACACCACTGATGATGCGCTTCCAAGCTTGGAAGATCAAGGAGTTCGTCAGCTCTATCCGAAAGGGCCAAATGTTGATTTCAAGAAGGAATTGAGATCGCTGAACAGAGAATTGCAGCTACATATTCTGGAGCTTGCAGATGTTCTTGTTGAGAGGCCATCCCAGTATGCAAGGAGAGTGGAGGACATATCTCTTATATTTAAGAACTTACACCACCTCCTCAATTCGTTGCGTCCCCACCAGGCGAGAGCAACACTAATTCACATACTAGAACTACAAATAAAACGCCGCAAGGAAGCCGTGGAGGATATAAAAGGGTATTTTTATTCTCAAATTTTGGGCGGTACCAGAAAAAATGTTTTAACTCATGGCATAAATTGA 513 0.4659 MAATATYPPPPPYYRLYKDFLQNPKSAPEPPPPIQGAYLLYGGSYTTDDALPSLEDQGVRQLYPKGPNVDFKKELRSLNRELQLHILELADVLVERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIKRRKEAVEDIKGYFYSQILGGTRKNVLTHGIN* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00812 170 Coils Coil 68 88 - -
Eupl05g00812 170 Gene3D - 64 154 IPR044888 -
Eupl05g00812 170 Pfam MED7 protein 5 149 IPR009244 GO:0003712|GO:0006357|GO:0016592
Eupl05g00812 170 SUPERFAMILY Mediator hinge subcomplex-like 67 151 IPR037212 GO:0016592
Eupl05g00812 170 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 2 149 IPR009244 GO:0003712|GO:0006357|GO:0016592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Eupl05g00812 Med7 1.2e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00812 K15148 - tcc:18599197 271.166