Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00795 ATGCCTTCAAAGACTCGGAAGCATTCAAAGACGCCATCAAAGCTCTCATATTCAGACCAGTCTGCATCCCCTCACGCCTCATCATCATCAACGCGTCCTCATGAACCAGAAGTTAGTGAGGAAGACATCTCTTGCTCCCTCCTCGAAGAAGCATCAATCAGATACCCATCTTTGATCTCCAAATCTGCTTTCGTTGGTCGAATCATAGATGTTGAGACCGATTCCGGACGCCCTGCTGCCAAGGTTTGGCTCTCCGAGTCCGCCATGGTTTCTTACTCTCTTGTCCCTGGCTCCGTCGTTTCGGTGTCACTTGCTTCTTCAAGGAAGGGACTTTTAAGTGGCTCTCTTCTTGATTCATTAACAGTTGAATGTGCTAGGGATTATGGCATTGATGTTGGGGATAAAAAGCGCAACGAAATGGGGAGTTACTTTGCGCTTGCAGTGGTTTTTCCTTCTTGTAAGGTTTTGAAGAATGGGGTACGATTGTCATGGAGTCTTTCTTGCACAATGGGCAATCCTGCTTCTGGCAGGATCACATTTGTTTTCCCCATTCGAACTCACTCCGTAGCTGGCGTTCTAAATGGGATTGAGAAGCTGCACGACTCAACTAATTCCACAGATTCTTGTCTCTCATTGTGCAATTGCAAGGACCTGTATTTAGAACTGGTTCCATCAAAGAATGGACTAAAAATGAATGATAATATCTTGCCTCCCATTAATTCTTCATCAGAAACACACCATGATCAATTTGAAAATGGAAAGGTTTCATCTCCCAAGACGCCATTGTTCCACCAGTCGCAGCTTAATTCTCCTGGTGTTAGTCGTGTGCTTTTGGGAAGATGCCAAGAGTCCATGTCAAGTGTACATTCAAATGAGACTTTGTTTAATACATATGATATAGGAGAAGCACTTGGGGACAAAAAGTCAAGGGAACTTTTGCAGACCTGTGCTGCTGTCTGGCTACATGCTCGCTTTCTAATGTATGGAAATTTTGCGGTCATCCCGATGGGTGGGCAGACTTTTACATTCCGTGTGGAAGGTGCAAATAGATTACCAACGGAATGTCCTAGCCAGGATTCGATAGATGGAGGAAAACATGATTTGTTCCATCATGAGGCTCAAACTCCCAATGTGGTGGACCAAGTGGATGTTGCCTTTGTTGTAGACTACAAAACAAAAGTACATTTATATTCATCATTGCCTTTAGCAACACAAACTCCAGATAAAACAGGTTTACCACCCGTGGGGCTTGAATGTAAAGATATCAAGGACAAGGAGGCGGGCCATATTTCAAAATTGGGTGGTCTGTCGAAAGAATTTGCAGTTCTGAGGGAAATAATTATTTCCTCAGCAGTGGATGACACTTTGTCAAGTCTGGGTTTGAGAACTACAAAGGGAGTGCTTCTTCATGGTCCACCTGGCACTGGAAAGACATCTTTGGCTCATTCATGTGTTTGTGATGCTGGTGTCAACCTTTTCTCTGTAAATGGACCTGAGATCATAAGTCAATACCATGGAGAGAGTGAACAAGCATTGCATGAAGTTTTTGATTCAGCTAGCCGATCTGCACCTGCCGTGGTGTTCATTGATGAGCTGGATGCTATTGCCCCTGCACGAAAAGATGGAGGTGAAGAGCTTTCTCAGAGAATGGTTGCAACATTGTTGAATTTGATGGATGGAATCAGTAGATCTGATGGCATAATTGTAATTGCTGCCACTAACAGGCCTGATAGTATTGATCCTGCCCTGAGACGGCCAGGAAGACTTGACCGAGAAATTGAAATAGGAGTGCCATCTCCAAAGCAGCGGTTGGATATATTGCGTACCCTTCTCAGTGAAATGGACAACTCCCTTGTAGACAAACAAGTTCAACTTCTCGCTTCGACCACGCATGGATTTGTTGGTGCCGATCTAGCTGCACTTTGCAACGAGGCAGCATTGGTTTCTCTTAGGCGTCATGTTAAGTTCAAGAAATCTTATGATTCGTCAGCAGTGACACCAGATTATGTTCAGTCCAAGGAAACACGTCTTGGATATGATGATTGTACAGATGATATAATGGGAGGATCTGGTCCCTCTACTGATACAGGGAACATGTTTTCCACAGATCATGTGGATTCTGCATCGTCGTCCCTCTCAGTTCTAACTGTATCGTTGGAAACTGTCCAGTCTTTTGGTTTCAGTGCAACAAACCAACAAAGATTTGATACTCTTCACTTCAGTAGTGACAAGGTGGCTTCTGTAACGGTAGAAGAAGCTTTGCTTAAAGTGACTTTTGATGATTTTGAAAAGGCTAAGATGAAAGTGAGGCCCAGTGCTATGCGAGAGGTTATACTTGAGGTTCCAAAGGTGAGCTGGGAAGATGTTGGTGGCCAAAATGAGGTTAAGAAACAGCTGATGGAAGCTGTAGAATGGCCACAAAAGCATCAGGATGCATTTAAGCGTATTGGGACTCGCCCACCAACAGGAATATTGATGTTTGGACCTCCAGGCTGCAGCAAGACCCTAATGGCCCGTGCAGTAGCTTCTGAAGCAGGGCTGAACTTCCTTGCAGTGAAGGGTCCTGAACTTTTCAGCAAATGGGTTGGTGAATCGGAGAAGGCTGTAAGATCTTTGTTTTCCAAAGCAAGGGCCAATGCCCCGTCGATCATATTTTTTGATGAAATAGATGGTCTTGCCATCATCCGTGGGCAGGAAAATGATGGGGCGTCTGTTGCCGATAGAGTCATGAGTCAACTTCTAGTTGAATTGGACGGTTTGCACCAAAGAGTGGATGTTACAGTTATTGCGGCTACCAATCGCCCAGACAAGATCGATCCAGCGCTTCTAAGACCAGGACGCTTTGATCGGTTGTTGTATGTGGGACCCCCAAATGAAGTCGACCGAGAAGATATATTTCGTATCCATATGCGAAAAATGCCTTGCAGTTCTGATGTCAGCATGCGGGAGCTGGCTCATCTCACCAAAGGCTGTACCGGGGCAGATATATCATTAATCTGCCGGGAAGCAGCTGTTGCAGCCATTGAAGAGAACCGTGATGCCTCGGAAATATCAATGGCACATTTTAAGATTGGACTTGGACGAGTGCAGCCGTCCGAGTTCCACTCTTACCAGGATTTCTCGGCGAAGTTTCAAAGGCTTGTTTGCACTGATGCTACAAGAGATGATATGGGGTTTCAACCGAGTTCGAGCTCATCCAACTGGATCGCATTCTGGACCCAAATTAAATCTCTAATACTGTTGCTTTTCCGGCTCCCTGCGGCCTTTGTACCATCAAAAGCTTCTTCTTCTTAG 3294 0.4511 MPSKTRKHSKTPSKLSYSDQSASPHASSSSTRPHEPEVSEEDISCSLLEEASIRYPSLISKSAFVGRIIDVETDSGRPAAKVWLSESAMVSYSLVPGSVVSVSLASSRKGLLSGSLLDSLTVECARDYGIDVGDKKRNEMGSYFALAVVFPSCKVLKNGVRLSWSLSCTMGNPASGRITFVFPIRTHSVAGVLNGIEKLHDSTNSTDSCLSLCNCKDLYLELVPSKNGLKMNDNILPPINSSSETHHDQFENGKVSSPKTPLFHQSQLNSPGVSRVLLGRCQESMSSVHSNETLFNTYDIGEALGDKKSRELLQTCAAVWLHARFLMYGNFAVIPMGGQTFTFRVEGANRLPTECPSQDSIDGGKHDLFHHEAQTPNVVDQVDVAFVVDYKTKVHLYSSLPLATQTPDKTGLPPVGLECKDIKDKEAGHISKLGGLSKEFAVLREIIISSAVDDTLSSLGLRTTKGVLLHGPPGTGKTSLAHSCVCDAGVNLFSVNGPEIISQYHGESEQALHEVFDSASRSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGISRSDGIIVIAATNRPDSIDPALRRPGRLDREIEIGVPSPKQRLDILRTLLSEMDNSLVDKQVQLLASTTHGFVGADLAALCNEAALVSLRRHVKFKKSYDSSAVTPDYVQSKETRLGYDDCTDDIMGGSGPSTDTGNMFSTDHVDSASSSLSVLTVSLETVQSFGFSATNQQRFDTLHFSSDKVASVTVEEALLKVTFDDFEKAKMKVRPSAMREVILEVPKVSWEDVGGQNEVKKQLMEAVEWPQKHQDAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFSKARANAPSIIFFDEIDGLAIIRGQENDGASVADRVMSQLLVELDGLHQRVDVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNEVDREDIFRIHMRKMPCSSDVSMRELAHLTKGCTGADISLICREAAVAAIEENRDASEISMAHFKIGLGRVQPSEFHSYQDFSAKFQRLVCTDATRDDMGFQPSSSSSNWIAFWTQIKSLILLLFRLPAAFVPSKASSS* 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00795 1097 CDD RecA-like_CDC48_r2-like 795 954 - -
Eupl05g00795 1097 FunFam spermatogenesis-associated protein 5-like protein 1 957 1041 - -
Eupl05g00795 1097 Gene3D - 417 596 IPR027417 -
Eupl05g00795 1097 ProSitePatterns AAA-protein family signature. 567 585 IPR003960 GO:0005524|GO:0016887
Eupl05g00795 1097 MobiDBLite consensus disorder prediction 14 33 - -
Eupl05g00795 1097 MobiDBLite consensus disorder prediction 1 41 - -
Eupl05g00795 1097 CDD RecA-like_CDC48_NLV2_r1-like 432 595 - -
Eupl05g00795 1097 ProSitePatterns AAA-protein family signature. 926 944 IPR003960 GO:0005524|GO:0016887
Eupl05g00795 1097 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 429 670 IPR027417 -
Eupl05g00795 1097 PANTHER AAA-FAMILY ATPASE 73 1045 - -
Eupl05g00795 1097 Gene3D - 785 956 IPR027417 -
Eupl05g00795 1097 FunFam Putative vesicular transport protein (CDC48) 417 596 - -
Eupl05g00795 1097 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 782 1029 IPR027417 -
Eupl05g00795 1097 Gene3D - 598 784 - -
Eupl05g00795 1097 SMART AAA_5 463 599 IPR003593 GO:0016887
Eupl05g00795 1097 SMART AAA_5 820 958 IPR003593 GO:0016887
Eupl05g00795 1097 Pfam ATPase family associated with various cellular activities (AAA) 467 596 IPR003959 GO:0005524|GO:0016887
Eupl05g00795 1097 Pfam ATPase family associated with various cellular activities (AAA) 824 955 IPR003959 GO:0005524|GO:0016887
Eupl05g00795 1097 FunFam calmodulin-interacting protein 111 isoform X1 781 956 - -
Eupl05g00795 1097 Gene3D - 957 1016 - -
Eupl05g00795 1097 Pfam AAA+ lid domain 623 655 IPR041569 -
Eupl05g00795 1097 Pfam AAA+ lid domain 978 1023 IPR041569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00795 Eupl-Chr5 28407038 28426695 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00795 1 1084 Calmodulin-binding Proteins AT3G56690 53.846 0.0 1028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00795 - - nnu:104607864 1370.53