Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00786 ATGTCGATGATCTCTGCAGAAACCTTCAAAGAAATTGCAGAAAACATGTTCATGGCGATGGACATAGATCTCGCACTCTTTTGCGCTGAGATGGCTAAAGAGCTCAGTCCCCAACTCGACGGCATCGATCATTTACTAGCAGCTTATAATACTCACGCGACGGCTACATTTAAGAGAATCAACGGTGAGACGGATTGGTATGCAGTTCTTGGTGTTGCAGATGCTTCAGCTGACGTCGAGACGATCAAGAAGCAATACAAGAGAATGGCTTTCATGGTTCACCCAGACAGAAACAAGTCCGTAGCTGCTGATGGCGCCTTCAATCTTATCTCCGAGGCGTGGAAAATCTTATCCAATCCCGACACACGAAAGGCGTATGATGATGGATCCGGTTTCACTCCATTGTCTCAATATTGGCCATATCATTGTCCATAG 435 0.4598 MSMISAETFKEIAENMFMAMDIDLALFCAEMAKELSPQLDGIDHLLAAYNTHATATFKRINGETDWYAVLGVADASADVETIKKQYKRMAFMVHPDRNKSVAADGAFNLISEAWKILSNPDTRKAYDDGSGFTPLSQYWPYHCP* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00786 144 ProSiteProfiles dnaJ domain profile. 65 130 IPR001623 -
Eupl05g00786 144 SUPERFAMILY Chaperone J-domain 56 127 IPR036869 -
Eupl05g00786 144 Gene3D DnaJ domain 48 134 IPR036869 -
Eupl05g00786 144 Pfam DnaJ domain 65 127 IPR001623 -
Eupl05g00786 144 PRINTS DnaJ domain signature 86 101 IPR001623 -
Eupl05g00786 144 PRINTS DnaJ domain signature 67 85 IPR001623 -
Eupl05g00786 144 PRINTS DnaJ domain signature 102 122 IPR001623 -
Eupl05g00786 144 SMART dnaj_3 64 122 IPR001623 -
Eupl05g00786 144 CDD DnaJ 65 119 IPR001623 -
Eupl05g00786 144 PANTHER BNAC03G44070D PROTEIN 6 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00786 Eupl-Chr5 28259602 28260180 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00786 6 127 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.714 2.01e-22 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00786 - - ncol:116247141 121.709