Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00780 ATGGCTACAAAATCGTCCGCGCTTGATTACTGGCGGAAGTACTTTCGGAGCGCTAACACTGATATCTTCGAGGTCATCGAGAATGCGATCATGGTTGCTGCTTCGGATTGCCCGAAGGAGTTCAGAACTCGAAGGGATCGAATCGCTGAGAAGCTGTTCTCATGTCGGTTAACCCGGTGTACTGGGTGCGATAGCGTTGAGTTAGCGGTTCCGGAGGAGGAAGGAGGTGGAGGTGGAGGTTTTAAGAGTGGATTTGATGGGAGTGGTGCCGATTTTGAGGGTGGTGAAGGGAAGGACAGCAAGGTGAATAGCAGTACGAATGATAACCATGAGATGAACACGAATCGGGTGAGCAATTATAGCTATGATGAAGCTGAGGCGTTGACGGAGGAGATTGAAGAAGAGAGTCAGATTGTTGGGGAGGTTCTGAGGATCAAAGAGGTTCTTTCCAATAGTGAAGATGAGTCTGATGGGGTGGTGTTTGATTCATTAAGGAGGCTTCAATTGATGGCACTCTCTGTGGAAACTCTGAAGGCAACAGAGATTGGAAAGGCAGTTAATGGTCTTCGAAAGCAGGGATCAAAACAGATTCGTCACCTTGCCCGGACTCTCATCGATGGGTGGAAGGTTATGGTAGATGACTGGGTCAATGCCGCAGCAGCTATTCCAGTTGCAGATAGTTCACCAGACTCTGTGAACCCCTCGGTTGATGAGGAGGAAGAAGAAGAAGGGCTCCCTTCTCCTCCCCTAGACGAAGGAGCTTTCTTTGCTACTCAGACTACTACAATAGAATTGTCGCAGTTCTTTGATGGAATGGATGATGATGGAAATCCTCGAAACAGTGGGGAATTCAACAAGAACCGTGCGAATGGAAGAAGGCCCACACTGGAAAACCACAGTATTCCCAGGAGGAAGCCGCAGCCTCATGCGGCAATTGTGCTCACCAAGGAGAACAAGGGAGACCAGATGAGGAAACAAGAAGCTGTGATCAAGCAAACTAAGCCCTGCAACACTGATTCAGGACCAGGGAGACCTCTAAAGTTAAGCTCCGAGCACAAAGCCAATAATGAAATGATATTGCATCAAAAACTGGATATAGTAGGATTTCAAAAGAGGTCCTTGTCTGGTCAACAAGATAAATCAAAGTGTTCGGATGAGGTTTCAGCCCGACTGAAACTCGAAGCTGCCAAGAGGAAGCTCCATGAAGGGTACCAACAAGCGGAGAACGGTTCGCCCCTCCCATTTTTGAGTCCTTACATGGTCCTTTTATTCTATCAACTTATAGGGCCTTGGTCACAGAAATCCTCATGTCAGACCTGGGAACCACAACCGGCATTGGTCGAACGGACGGCGGTAGTTGTGCCTATTTTGCAAAGTACCGATCAGTTTTTTTCTTCCATTTATGAATCCAATAATGGAAGAACATCAAAAACTCTCTGGTTTACTGGGACTTCACCCAGTTGA 1464 0.4747 MATKSSALDYWRKYFRSANTDIFEVIENAIMVAASDCPKEFRTRRDRIAEKLFSCRLTRCTGCDSVELAVPEEEGGGGGGFKSGFDGSGADFEGGEGKDSKVNSSTNDNHEMNTNRVSNYSYDEAEALTEEIEEESQIVGEVLRIKEVLSNSEDESDGVVFDSLRRLQLMALSVETLKATEIGKAVNGLRKQGSKQIRHLARTLIDGWKVMVDDWVNAAAAIPVADSSPDSVNPSVDEEEEEEGLPSPPLDEGAFFATQTTTIELSQFFDGMDDDGNPRNSGEFNKNRANGRRPTLENHSIPRRKPQPHAAIVLTKENKGDQMRKQEAVIKQTKPCNTDSGPGRPLKLSSEHKANNEMILHQKLDIVGFQKRSLSGQQDKSKCSDEVSARLKLEAAKRKLHEGYQQAENGSPLPFLSPYMVLLFYQLIGPWSQKSSCQTWEPQPALVERTAVVVPILQSTDQFFSSIYESNNGRTSKTLWFTGTSPS* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00780 487 ProSiteProfiles TFIIS N-terminal domain profile. 140 215 IPR017923 -
Eupl05g00780 487 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 7 409 IPR044805 -
Eupl05g00780 487 MobiDBLite consensus disorder prediction 290 304 - -
Eupl05g00780 487 Pfam TFIIS helical bundle-like domain 164 212 IPR017923 -
Eupl05g00780 487 MobiDBLite consensus disorder prediction 225 251 - -
Eupl05g00780 487 MobiDBLite consensus disorder prediction 233 247 - -
Eupl05g00780 487 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 137 220 IPR035441 -
Eupl05g00780 487 MobiDBLite consensus disorder prediction 71 115 - -
Eupl05g00780 487 SMART TFS2_5 139 214 IPR003617 GO:0005634
Eupl05g00780 487 MobiDBLite consensus disorder prediction 99 115 - -
Eupl05g00780 487 CDD TFIIS_I 141 213 - -
Eupl05g00780 487 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 130 222 IPR035441 -
Eupl05g00780 487 MobiDBLite consensus disorder prediction 271 307 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Eupl05g00780 Med26 3.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00780 - - nnu:104607851 545.043