Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00774 ATGGCGAAGCGCTTGATCCCATCTCTGAATCGCGTTTTGGTGGAGAAAATCGTTCCTCCATCAAAAACCAATGCTGGAATCTTACTCCCTGAGAAGACCAACAAGCTGAATTCTGGAAAAGTTGTTGCGGTGGGTCCTGGAGCTCATGATAGAGATGGGAAACTCATTCCTGTTAGTGTAAAGGAAGGTGATACTGTTCTTTTACCTGAATATGGAGGAATGGAAGTGAAGCTTGGTGAGAAAGACTCTGGTGTCTCCATTGTTATCAGTTGTATCATCTGTATAGAGATGACGACATATTGGGAACCCTGCATGATTGAGATATTTCCTGCTTATTCACAGGTTAGAAATTTAGAAAATGATTTTGATGCCTTTGAAGCTGTCATAGAATGTTGCAGAGTTCGGCTGTGGGGTTGCTGCTCAGCAGTTCTGTTATACCCTTATGCCTCTGAACTAGATGGAAGAAACATCATAGTTTGCTATTATTGA 489 0.4192 MAKRLIPSLNRVLVEKIVPPSKTNAGILLPEKTNKLNSGKVVAVGPGAHDRDGKLIPVSVKEGDTVLLPEYGGMEVKLGEKDSGVSIVISCIICIEMTTYWEPCMIEIFPAYSQVRNLENDFDAFEAVIECCRVRLWGCCSAVLLYPYASELDGRNIIVCYY* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00774 162 PANTHER 10 KDA HEAT SHOCK PROTEIN 1 82 IPR020818 GO:0005524|GO:0006457|GO:0044183
Eupl05g00774 162 CDD cpn10 4 82 IPR020818 GO:0005524|GO:0006457|GO:0044183
Eupl05g00774 162 Gene3D GroES chaperonin 1 97 IPR037124 GO:0006457
Eupl05g00774 162 FunFam 10 kDa chaperonin, mitochondrial 1 86 - -
Eupl05g00774 162 SUPERFAMILY GroES-like 4 82 IPR011032 -
Eupl05g00774 162 PRINTS 10kDa chaperonin signature 61 73 IPR020818 GO:0005524|GO:0006457|GO:0044183
Eupl05g00774 162 PRINTS 10kDa chaperonin signature 26 47 IPR020818 GO:0005524|GO:0006457|GO:0044183
Eupl05g00774 162 PRINTS 10kDa chaperonin signature 5 20 IPR020818 GO:0005524|GO:0006457|GO:0044183
Eupl05g00774 162 Pfam Chaperonin 10 Kd subunit 6 82 IPR020818 GO:0005524|GO:0006457|GO:0044183
Eupl05g00774 162 SMART Cpn10_2 4 93 IPR020818 GO:0005524|GO:0006457|GO:0044183
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00774 Eupl-Chr5 28019889 28026247 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00774 3 95 Calmodulin-binding Proteins AT5G20720 36.170 5.42e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00774 K04078 - csin:114271707 154.451