Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00762 ATGGGTAATTGTTGCTCCCTTGGCAACACCAGGAAAGCCCCAGAAACTCAAAAATGCGAATCGTTTTCTGGCAACCAGGCCGCAAATCACGGAAACCCAGGTTCTGAATATTCTGCCCCACCGAAGCCATCGGGTGTTGTAGCCCCCTCTTCAGCGGCATCGAAGCATTCCAAGAATGCTCCAATTGGACTGGTCTTGGGTCGGCCCATGGAAGATGTTCGATCCATCTATACGATTGGGAAGGAGCTTGGACGGGGACAATTCGGTGTCACCCATCTATGTACCCAGAAGGGTACAGGCGAGCAATTCGCATGTAAGACAATAGCGAAACGGAAACTCGTCAACAAGGAGGATATTGAGGATGTTAGGAGGGAAGTTCAAATCATGCATCACTTGACAGGCCAACCCAACATTGTAGAATTGAAGGGAGCTTATGAGGATAAGCAGTCGGTTCATTTGGTGATGGAGTTATGCGCCGGGGGAGAGCTCTTCGATCGGATTATTGCGAAAGGGCATTATACAGAACGTGAGGCAGCATCGCTGCTGAGGACGATTGTTCAGATTGTTCATACATGTCATACAATGGGAGTCATCCATAGGGATCTCAAGCCAGAGAATTTCCTTCTGTTGAATAAGGACGAGAACGCCCCTCTCAAGGCTACAGATTTCGGGCTCTCTGTGTTCTTCAAGCAAGGTGAAGTGTTCAGAGATATCGTTGGCAGCGCATATTATATTGCACCAGAAGTCTTGAAGAGAAGATATGGACCAGAAGTTGATATATGGAGTATCGGAGTCATGTTGTATATTCTTCTCAGTGGAGTTCCTCCTTTTTGGGCTGAATCAGAGCATGGAATTTTCAATGCAATCTTACGTGGGCACATCGATTTCACGAGTGATCCATGGCCGGCAATTTCATCTGGAGCCAAGGATCTGATCAGGAAGATGCTCAATGCAGACCCCAAGCAGAGACTGACAGCATTCCAAGTTCTAGATCATCCATGGATCAAAGAAGATGGAGAAGCACCTGACACACCTCTTGACAATGCTGTCTTCAACAGGCTCAAACAATTCAGAGCAATGAACAAGTTCAAGAAAGTTGCTCTTCGGGTTATAGCTGGTTGTCTATCAGAGGAAGAAATCATGGGATTGAAGGCGATGTTCAAGAACATAGACACTGACAATAGTGGGACTATAACACTTGAAGAGCTGAAACAAGGACTCTCCAAGCAAGGAACAAAGTTATCTGAGTACGAGGTTAAACAGCTAATGGAAGCTGCCGATGCAGACGGCAATGGGACCATAGACTATGACGAGTTCATCACGGCAACAATGCACATGAACAGGATGGATAGAGAAGAGCATCTTTATACTGCATTCCAATACTTCGATAAAGACAATAGTGGGTATATTACAACAGAAGAGCTAGAGCAAGCTCTCCGAGAGTTTGGCATGCACGATGGGAGAGACATAAAGGAAATCCTTTCTGAAGTCGATGCGGATAATGATGGACGGATCAACTACAACGAGTTTGTGGCAATGATGAGAAAAGGGAACCCGGAAGTAAACCCAAAGAAGCGACGCGATGTGTTCGTCTGA 1596 0.4618 MGNCCSLGNTRKAPETQKCESFSGNQAANHGNPGSEYSAPPKPSGVVAPSSAASKHSKNAPIGLVLGRPMEDVRSIYTIGKELGRGQFGVTHLCTQKGTGEQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTEREAASLLRTIVQIVHTCHTMGVIHRDLKPENFLLLNKDENAPLKATDFGLSVFFKQGEVFRDIVGSAYYIAPEVLKRRYGPEVDIWSIGVMLYILLSGVPPFWAESEHGIFNAILRGHIDFTSDPWPAISSGAKDLIRKMLNADPKQRLTAFQVLDHPWIKEDGEAPDTPLDNAVFNRLKQFRAMNKFKKVALRVIAGCLSEEEIMGLKAMFKNIDTDNSGTITLEELKQGLSKQGTKLSEYEVKQLMEAADADGNGTIDYDEFITATMHMNRMDREEHLYTAFQYFDKDNSGYITTEELEQALREFGMHDGRDIKEILSEVDADNDGRINYNEFVAMMRKGNPEVNPKKRRDVFV* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00762 531 SMART efh_1 454 482 IPR002048 GO:0005509
Eupl05g00762 531 SMART efh_1 418 446 IPR002048 GO:0005509
Eupl05g00762 531 SMART efh_1 382 410 IPR002048 GO:0005509
Eupl05g00762 531 SMART efh_1 489 517 IPR002048 GO:0005509
Eupl05g00762 531 Pfam Protein kinase domain 77 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g00762 531 ProSiteProfiles EF-hand calcium-binding domain profile. 378 413 IPR002048 GO:0005509
Eupl05g00762 531 MobiDBLite consensus disorder prediction 1 33 - -
Eupl05g00762 531 Gene3D - 376 444 - -
Eupl05g00762 531 SUPERFAMILY EF-hand 375 516 IPR011992 -
Eupl05g00762 531 Gene3D Transferase(Phosphotransferase) domain 1 163 343 - -
Eupl05g00762 531 ProSitePatterns EF-hand calcium-binding domain. 391 403 IPR018247 -
Eupl05g00762 531 ProSitePatterns EF-hand calcium-binding domain. 498 510 IPR018247 -
Eupl05g00762 531 FunFam calcium-dependent protein kinase 1 163 342 - -
Eupl05g00762 531 FunFam Calcium-dependent protein kinase 1 79 162 - -
Eupl05g00762 531 ProSiteProfiles EF-hand calcium-binding domain profile. 450 485 IPR002048 GO:0005509
Eupl05g00762 531 ProSiteProfiles Protein kinase domain profile. 77 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g00762 531 FunFam Calcium-dependent protein kinase 1 343 518 - -
Eupl05g00762 531 MobiDBLite consensus disorder prediction 1 54 - -
Eupl05g00762 531 SUPERFAMILY Protein kinase-like (PK-like) 64 360 IPR011009 -
Eupl05g00762 531 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Eupl05g00762 531 Gene3D Phosphorylase Kinase; domain 1 78 162 - -
Eupl05g00762 531 Gene3D - 353 514 - -
Eupl05g00762 531 Pfam EF-hand domain pair 452 515 IPR002048 GO:0005509
Eupl05g00762 531 Pfam EF-hand domain pair 383 443 IPR002048 GO:0005509
Eupl05g00762 531 ProSitePatterns Protein kinases ATP-binding region signature. 83 110 IPR017441 GO:0005524
Eupl05g00762 531 CDD STKc_CAMK 77 334 - -
Eupl05g00762 531 ProSitePatterns EF-hand calcium-binding domain. 427 439 IPR018247 -
Eupl05g00762 531 ProSiteProfiles EF-hand calcium-binding domain profile. 489 520 IPR002048 GO:0005509
Eupl05g00762 531 ProSitePatterns EF-hand calcium-binding domain. 463 475 IPR018247 -
Eupl05g00762 531 PANTHER SERINE/THREONINE-PROTEIN KINASE 73 510 - -
Eupl05g00762 531 ProSiteProfiles EF-hand calcium-binding domain profile. 414 449 IPR002048 GO:0005509
Eupl05g00762 531 SMART serkin_6 77 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00762 Eupl-Chr5 27855216 27859304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00762 1 529 EF-hand Containing Proteins AT5G12180 80.907 0.0 896
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Eupl05g00762 Pkinase 3.9e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00762 K13412 - msin:131227812 938.332