Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00759 ATGGATGGGACATGTGTAGAAAGTGTCGGAAATTCGGTTGAGGTTGAGAAACATGGGGTAACTAGTAATGAACCTATAGATTGTGATAAAATCAAGGAGCCATTCGTGGGGATGATGTTTGGTTCTTTTGAGGAAGCAAAAGATTTTTATGAGGAGTATGGTCGACATAAGGGGTATACTGTTCGTAAAAGATCCACGTACAAAGGTCGACGTGGACCAGAAGTGACAAGTGCCTTATTTGTATGCACATGTGAAGGGTTCTATCAAAAGACGCCTGAAAGTGATGACGAAGGGAAAATCAAGAGAAGTTGCTCAACGATGAGGAATGGTTGTAAGGCTCGCATGCGTGTTACGAATGTTAAAGGGACCACTAAATGGAAAGTTACAGTTTTCTCCGACGAGCATAATCATAAATTGGTCACTCCAAGCAAGAGAGTTCCCATGAAATCGAACAAGCAGCTTCATGCAGCTAAGGACTTAACCGAAAATCAAGTTGAAAAAGTTCCATCTATTTTTGGTGGGTGGTGTTCCAATGTAGCGTTTAATGATAAGGACTGTTGGAGCTGTCTAAAGGCGGTGAGGCATAGAGATATAGAAGCTGGAGATGTGCAGGCAGTGCTTACATATTTTAGGAAGAAGCAAACCGAGAATCCGCTTTTCTTTTATGCAATTCAATTGGACGAGAACTGTCGAATGACTAATTTCTTTTGGGTAGATGCTCGGTCGCGAATGGCAAATCATTACTTCGGAGATGTGATAACTTTTGATACAACTTATAGGATGAAGAAATACGATATGCCATTCGCTCCTTTTACCGGTGTGAACCATCACGATCAGTCAATGTTTTTTGGCTGTGCATTGTTACAAGACGAATCAGAGTCAACTTTTGTATGGTTATTTGAGACGTGGCTCGAGGCTATGGAGGGGCGACATCCAGTATCCATCATAACTAACCAAGACTTGGCTATTGAAAGGGCTGTAGCGAGAGTGTTCCCGGGTACACGTCATCGATTTTGCCTTTCGCATATTAAGAAAAAATTTGCAGAGAAGCTGACAAATGTATATTTCAAGAAATCGAAATTTAAACAGGCAATGAAGATATGTATTTATTATACCTACACAATCCAAGAATTTGAAGACCAGTGGGCTTCCTTGATGGTGGAATTTGAGTTGGAGGGAAACGAATGGCTTAAAAAACTTTACGAAATTCGGTCGTCCTGGGTTCCGGTTTACAATCGGAGCACATTCTTTGCTGGGTTGAATACAACTGGGAGAAGCGAGAGCATTACTGCATTCTTCGATGGCTTTGTTTCGCCAAAGACCAATCTGAGAGATTTTGTCATAAAGTACGAACGGGCACTAAATAGAATTTATGAAAAAGAAAGAAAAGAAGATTTTTTATCAATCTGCAAATCACGGACCTTGAGTACCAAAAGTTATTTGCTAACCCATGCGACTAACATTTACACAAGAACACTTTTTGAAAAGTTTCAAAGAGAATTTGATGAAGTCTATCGTTATAAAGCCGTAGAAGGTGAAACAGATGGTGAGTATCGCTTGTATATAGTGAAGGTGAGGGATGGTGTAGCAAGGGATGGTATACGTGAGGAGTTCCTTGTCAAGTTGAATTTGCAAACAAAAGAGGGTAAATGTGGTTGCCAGCATTTTGAATTCACAGGGATATTGTGCCAGCACATGTTAAAAGTTTTCGTGCGAAATGATGTTGATGAAATTCCACCTCATTTCATAATGAAAAGGTGGACGAAGGAGGCAAATAGAAGTGAGGTGGTGGATGCAGATGGATCTGTCATTCATGATCGCCATGTAGGGTCAGAAGTCACGAGAATTAACCATATATGTCGAAGATCAACTCAATTGGCATACATGGCAGGGATGTCAGAGGAGATATATGAGGTTATAATGGCTGTAATGGATGAGACTTTTAAGAAGGTTTCACTAATGGAGAAGGACTTGCTTAAGAACGAGAATGATGAGGAAACTCCAAATGAGGCTTTTGAAAGTCCAAAAAATCTTGGTATTGCTCCTGCTGAGACAATTGGATCTACAAATCAGTCAATACTTCTACATCCAAGTATATCACAAACGAAAGGCAGAAAGAGGGCTGTGAAGGTAAAGGAGAAGGTTAGCAATACTGGTAGATGGATGGGTGGCCTTGAGGTGTCAGTAGCCAATAAGACACCAAAACCAAAGAAATGTGCAACATGTGGAGTTCATGGCCATGAAAGATGTAATTCTGGCCACAAGAAAAGGAAACCTGAAGATAGTGAACAGGACTTGGATGATGACGCAATGCATTTAAGAACCCATGAAACTCGTGAATATGGAGATGTATTTCTCACATTATAG 2367 0.4052 MDGTCVESVGNSVEVEKHGVTSNEPIDCDKIKEPFVGMMFGSFEEAKDFYEEYGRHKGYTVRKRSTYKGRRGPEVTSALFVCTCEGFYQKTPESDDEGKIKRSCSTMRNGCKARMRVTNVKGTTKWKVTVFSDEHNHKLVTPSKRVPMKSNKQLHAAKDLTENQVEKVPSIFGGWCSNVAFNDKDCWSCLKAVRHRDIEAGDVQAVLTYFRKKQTENPLFFYAIQLDENCRMTNFFWVDARSRMANHYFGDVITFDTTYRMKKYDMPFAPFTGVNHHDQSMFFGCALLQDESESTFVWLFETWLEAMEGRHPVSIITNQDLAIERAVARVFPGTRHRFCLSHIKKKFAEKLTNVYFKKSKFKQAMKICIYYTYTIQEFEDQWASLMVEFELEGNEWLKKLYEIRSSWVPVYNRSTFFAGLNTTGRSESITAFFDGFVSPKTNLRDFVIKYERALNRIYEKERKEDFLSICKSRTLSTKSYLLTHATNIYTRTLFEKFQREFDEVYRYKAVEGETDGEYRLYIVKVRDGVARDGIREEFLVKLNLQTKEGKCGCQHFEFTGILCQHMLKVFVRNDVDEIPPHFIMKRWTKEANRSEVVDADGSVIHDRHVGSEVTRINHICRRSTQLAYMAGMSEEIYEVIMAVMDETFKKVSLMEKDLLKNENDEETPNEAFESPKNLGIAPAETIGSTNQSILLHPSISQTKGRKRAVKVKEKVSNTGRWMGGLEVSVANKTPKPKKCATCGVHGHERCNSGHKKRKPEDSEQDLDDDAMHLRTHETREYGDVFLTL* 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00759 788 ProSiteProfiles Zinc finger SWIM-type profile. 538 574 IPR007527 GO:0008270
Eupl05g00759 788 SMART 26again6 549 576 IPR006564 GO:0008270
Eupl05g00759 788 MobiDBLite consensus disorder prediction 753 767 - -
Eupl05g00759 788 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 22 652 IPR031052 GO:0006355
Eupl05g00759 788 Pfam MULE transposase domain 252 346 IPR018289 -
Eupl05g00759 788 Pfam FAR1 DNA-binding domain 48 140 IPR004330 -
Eupl05g00759 788 MobiDBLite consensus disorder prediction 745 767 - -
Eupl05g00759 788 Pfam SWIM zinc finger 546 570 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00759 Eupl-Chr5 27818268 27823629 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Eupl05g00759 MULE 5e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00759 - - pavi:110757838 746.117