Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00749 ATGAAGGTCCCTTGTTGCTCGGTATGTCAGATGAGATACAACGAGGAGGAAAGAGTCCCTCTTTTACTCCAATGCGGTCACGGCTTCTGCAAAGAATGCCTTTCTCGAATGTTCTCCGCATCTTCCGACACCACTCTCTCCTGCCCTCGTTGCCGTCACCTCTCCATCGTCGGCAACTCCGTCCACGCCCTCCGCAAGAACTTCGCCGTCCTCTCCCTCATCCACTCCTCCTCCTCCTCCGCTACCGGTCTCGGTTGCGACTTTACTGATGATGATGATGATGACGACGACCGTGATGACGTTGAACTTGATGACGAAGAAGCGGATGAGTTCGGCCGTCGTAGGCGCAGCCGCCAGGCTCATGCTTCGAGCTCTAGTTGCAGTAGCGGTGCTGGAGGCGGCTCTGTTATTGACCTTGCCTCGCATAATGATCTCAGGCTTATTCGGCGGCTTGGAGAGAGCCGGAGGGCTGGCGTGGAGATGTGGTCTGCCGTGCTCTCTGGCAGTTCTTCTTCGGGCAGGTGCCGTCACCGGGTGGCTGTGAAGAGGGTGACGGTTGGGGAGGAGACAGATTTGGTTTCGGCGCAGAGCCAACTTGAGAATCTTCGTCGGTCCTCGATGTGGTGCAGGAACGTGTGCACGTTCCATGGCGCTATGAGGTTGGACGGCCGCCTCTGCCTTATTATGGATAGGTATTGCAGCTCTGTGCAGTCCGAGATGCAGCAGAACGAAGGGCGCCTCACTCTGGAGCAAATCCTCAGATATGGGGCAGACATTGCTCGTGGTGTGGCTGAGCTCCATGCAGCAGGTGTTGTCTGTATGAATCTTAAGCCATCCAATCTTCTTGTAGATGCAAGTGGTCGGGCAGTTGTTTCTGATTACGGTCTTCCAGCAATTCTGAAGAAGCCTTTTTGCCGAAAAGCTAGGTCAGTTCCAGAGGATGATTCTTCAAGAATGCATTCATGCATGGATTGTACAATGTTGAGCCCACACTACACAGCTCCTGAGGCATGGGACCCATTGAAGAAGACTTTATTCTGGGATGATGCAATTGGTATATCTACAGAGTCAGATGCCTGGAGTTTTGGGTGTACCCTAGTGGAAATGTGCACTGGTTCCATCCCGTGGTCTGGTTTAAGTTCGGAGGAAATCTATCGAACTGTTGTCAAGGGTCGGAAGCTGCCCCCACAGTACGCAAGTGTGGTGGGTGTTGGAATACCTAGGGAGTTATGGAAGATGATTGGTGAGTGCCTACAGTTCAAGGCATCAAAGAGACCAACTTTCCATGCAATGCTCACAATATTCCTTCGCCACTTGCAAGAGATACCTCGCAGCCCTCCTGCAAGCCCCGATAATGACTTTGCCAAGGGTCCTGGAACGAATGCCATGGAACCGTCCCCTACATCTGTCTTGGACGTTTTCCAGGATAACCCAAACCTTTTACATCAACTTGTATCTGAAGGGAATCTGGCTGGCGTTAGAGATCTGCTTGCAAAGGCTGTATCAGGAAACAATAGCAACTCGATTGGTTCTCTATTAGAAGCACATAATGCTGATGGCCAAACTGCTCTGCACTTGGCTTGCAGACGAGGTTGCGTAGAACTTGTTGAAGCTTTTTTGGAGTACAATGAGGCAGATGTTGACGTTCTGGACAAAGATGGAGACCCTCCAATTGTGTTCGCTTTAGCAGCTGGATCCCCAGATTGCATTCGTGCTCTCATCAGAAGGTCTGCTAACGTGAGATCTAGGCTGAGGGAAGGCTTTGGTCCATCTGTTGCTCATGTTTGTGCTTACCATGGTCAACCAGATTGCATGCGTGAGTTATTATTGGCAGGGGCTGATCCCAATGCAGTGGATGATGAAGGTGAATCTGTGCTGCACAGAGCCATTGCCAAGAAATACACAGACTGTGCTATTGTCATATTGGAACATGGAGGCTGCAGATCAATGGGTGTTCTGAATGCTAAAAATTTGACACCTTTGCACATGTGCGTAGCAACATGGAATGTGGCTGTTGTGGGAAGGTGGGTGGAAGTTGCATCCCAAGAAGAGATTGCTGAAGCTATTAATATACCAAGTCCAGTTGGAACAGCACTGTGTATGGCAGCTGCCCTAAAGAAAGACCATGAAACTGAGGGTAGAGAATTGGTGAGAATATTGCTTGCTACTGGAGCGGATCCAACAGCACAAGATACACAGCATTGGCGAACAGCTTTGCATACGGCAGCTATGGCTAATGATATAGAGTTGGTCAAGATTATACTGGATGCTGGAGTTGACGTGGACATCAGGAATGTGCATAATACTATACCTCTTCATGTCGCATTAGCCAGAGGTGCAAAACTATGTGTTGGGTTGCTTTTATCCGCTGGAGCAAACTGTAATTTGCAGGATGATGAAGGTGACAATGCATTCCATATAGCAGCTGAAACAGCAAAAATGATACGTGAAAATCTTGAATGGATCGTTATTATGCTGCGGTATCCAGGTGCTGCTATTGAAGTCAGAAATCACAGTGGTAAGACATTACGCGATTATTTGGAAGCCCTGCCGCGGGAATGGATTTCAGAAGATCTGATGGAAGCACTCATGAATAAGGGAATTCTTCTGTCTCCTACCATATATGAGATAGGGGATTGGGTGAAATTCAAAAGAAGCGTGAAGACTCCTACATATGGGTGGCAAGGTGCAAAGCATAAGAGTGTCGGTTTTGTTCAGAGTATCCAAGACAAGGACAATCTCATTGTATCATTTTGCTCTGGAGAGGCTCGTCTTCTGGCAAACGAGGTTACAAAAGTGATCCCATTAGACAGGGGACAGCACGTGCAACTTAAACCCGATGTGAAAGAGCCACGGTATGGGTGGCGTGGTCAATCACGTGACAGCATTGGTACTGTTCTATGTGTTGATGATGATGGGATTCTCCGAGTTGGCTTTCCCGGAGCATCCAGGGGGTGGAAAGCTGACCCTGCAGAAATGGAAAGGGTTGAAGAATTCAAGGTTGGTGACTGGGTTCGGATTCGCCCCTCTCTAACAACTGCAAAACATGGATTGGGAGCTGTAACACCTGGGAGCATTGGGATAGTATACTGTATCAGACCAGACAATAGTCTTTTGTTGGAACTGAGCTATCTACCAAGTCCATGGCATTGTGAACCAGAGGAGGTTGAACCTGTTATCCCATTCAGGATTGGTGACCAAGTATGCGTTAAGCGATCTGTTGCGGAGCCAAGGTATGCTTGGGGTGGTGAGACACATCATAGTGTGGGAAGAATAAGTGAGATAGAGAGTGATGGTCTATTGATAATTGAGATACCTAATCGCCCGATTCCATGGCAAGCTGATCCTTCTGACATGGAAAAGGTGGAGGGTTTCAAGGTTGGGGATTGGGTGAGAGTGAAAGCTTCTGTATCCTCCCCAATATATGGGTGGGAGGATGTTACGCGGAATAGTATCGGGATAATCCATAGCCTGGAGGAGGATGGGGATATGGGTGTTGCCTTCTGCTTCAGGAGCAAGCCTTTCCGTTGCTCCGTGACAGACATGGAGAAGGTACCACCTTTTGAAGTGGGACAAGAGATTCATGTGATGGGATCTGTTTCTCAGCCACGGCTTGGATGGTCAAATGAAACTCCATCAACCATTGGGAAGATCGCAAGGATAGACTTGGATGGAACTCTGAATGTGAGAGTGGTTGGGAGAGTTAGCTTGTGGAAGGTTGCTCCTGGAGATGCAGAACGCCTTTCAGGATTTGAAGTTGGCGACTGGGTTCGTTTAAAGCCAAGCATGGGGACTAGACCCAGTTATGACTGGAATAGCATTGGAAAAGAAAGTTTAGCTGTGGTGCACAGTGTACAGGAAAATGGTTATTTGGAGCTGGCATGCTGTTTCCGGAAAGGGAAGTGGATGACTCACTACACAGACATTGAAAAGGTTGCATGCTTAAAAATTGGGCAGCATGTCCGGTTTCGTGCTGGACTGGTTGAGCCAAGGTGGGGGTGGAGAGATGCCAACCACGGTTCAAGAGGCATTATAACCGGGGTGCATGCTGATGGAGAAGTGAGGGTGGCATTTTTTAATGTGTCGGGGTTGTGGAGAGGAGATCCTGCAGATCTTGAGATAGAGGAGATGTTTGAGGTGGGAGAGTGGGTGAGGTTAAGAGACGACGCAAATGGGTGGAAATCCGTGAGACCTGGGAGCATTGGCATTGTACAAGGAATAGGGTATGAAGGAGATGAATGGGATGGAAGTGTACTGGTTGGGTTTTGCGGGGAGCAGGAAAGGTGGATGGGGCCAGCTTCTCAGCTTGAACGAGTAGATGGGCTTGTGGTAGGGCAACAGGTGAGGGTAAAGATATGTGTGAAGCAGCCAAGGTTTGGTTGGTCGGGTCACAGCCATGCAAGTGTGGGGACCATATCCTCAATAGATGCAGATGGAAAGCTGAGGATCTATACACCTGCAGGCTCAAAGACGTGGATGCTGGACCCAGCAGAGGTGGAGAAAGTTGAGGAAGTGGAACTGCATATTGGAGACTGGGTAAAGGTGAAGGCAACCGTGGTGACACCAGTGCACCAGTGGGGTGAGGTGAGCCACGCCAGTATTGGTGTGGTACACAGAATAGAGGATGGGGAGCTTTGGGTGGCTTTCTGCTTCACAGAGAGGTTGTGGGTGTGCAAGGTATGGGAGATGGAGAGGGTGAGACCATTCAAGGTAGCAGACAAAGTGAGGATTAGAGGGGGATTAGTGAGCCCACGGTGGGGATGGGGGATGGAGACACATGCAAGCAAGGGGGAGGTGGTCGGGGTGGATGCAAATGGTAAGCTAAGGATAAGGTTCCAGTGGAGAGAAGGTAGACTGTGGATTGGAGACCCTGCTGATATTGTTCTTGATGAGAGCTCCACCGGCACCTCATAG 4914 0.4941 MKVPCCSVCQMRYNEEERVPLLLQCGHGFCKECLSRMFSASSDTTLSCPRCRHLSIVGNSVHALRKNFAVLSLIHSSSSSATGLGCDFTDDDDDDDDRDDVELDDEEADEFGRRRRSRQAHASSSSCSSGAGGGSVIDLASHNDLRLIRRLGESRRAGVEMWSAVLSGSSSSGRCRHRVAVKRVTVGEETDLVSAQSQLENLRRSSMWCRNVCTFHGAMRLDGRLCLIMDRYCSSVQSEMQQNEGRLTLEQILRYGADIARGVAELHAAGVVCMNLKPSNLLVDASGRAVVSDYGLPAILKKPFCRKARSVPEDDSSRMHSCMDCTMLSPHYTAPEAWDPLKKTLFWDDAIGISTESDAWSFGCTLVEMCTGSIPWSGLSSEEIYRTVVKGRKLPPQYASVVGVGIPRELWKMIGECLQFKASKRPTFHAMLTIFLRHLQEIPRSPPASPDNDFAKGPGTNAMEPSPTSVLDVFQDNPNLLHQLVSEGNLAGVRDLLAKAVSGNNSNSIGSLLEAHNADGQTALHLACRRGCVELVEAFLEYNEADVDVLDKDGDPPIVFALAAGSPDCIRALIRRSANVRSRLREGFGPSVAHVCAYHGQPDCMRELLLAGADPNAVDDEGESVLHRAIAKKYTDCAIVILEHGGCRSMGVLNAKNLTPLHMCVATWNVAVVGRWVEVASQEEIAEAINIPSPVGTALCMAAALKKDHETEGRELVRILLATGADPTAQDTQHWRTALHTAAMANDIELVKIILDAGVDVDIRNVHNTIPLHVALARGAKLCVGLLLSAGANCNLQDDEGDNAFHIAAETAKMIRENLEWIVIMLRYPGAAIEVRNHSGKTLRDYLEALPREWISEDLMEALMNKGILLSPTIYEIGDWVKFKRSVKTPTYGWQGAKHKSVGFVQSIQDKDNLIVSFCSGEARLLANEVTKVIPLDRGQHVQLKPDVKEPRYGWRGQSRDSIGTVLCVDDDGILRVGFPGASRGWKADPAEMERVEEFKVGDWVRIRPSLTTAKHGLGAVTPGSIGIVYCIRPDNSLLLELSYLPSPWHCEPEEVEPVIPFRIGDQVCVKRSVAEPRYAWGGETHHSVGRISEIESDGLLIIEIPNRPIPWQADPSDMEKVEGFKVGDWVRVKASVSSPIYGWEDVTRNSIGIIHSLEEDGDMGVAFCFRSKPFRCSVTDMEKVPPFEVGQEIHVMGSVSQPRLGWSNETPSTIGKIARIDLDGTLNVRVVGRVSLWKVAPGDAERLSGFEVGDWVRLKPSMGTRPSYDWNSIGKESLAVVHSVQENGYLELACCFRKGKWMTHYTDIEKVACLKIGQHVRFRAGLVEPRWGWRDANHGSRGIITGVHADGEVRVAFFNVSGLWRGDPADLEIEEMFEVGEWVRLRDDANGWKSVRPGSIGIVQGIGYEGDEWDGSVLVGFCGEQERWMGPASQLERVDGLVVGQQVRVKICVKQPRFGWSGHSHASVGTISSIDADGKLRIYTPAGSKTWMLDPAEVEKVEEVELHIGDWVKVKATVVTPVHQWGEVSHASIGVVHRIEDGELWVAFCFTERLWVCKVWEMERVRPFKVADKVRIRGGLVSPRWGWGMETHASKGEVVGVDANGKLRIRFQWREGRLWIGDPADIVLDESSTGTS* 1638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00749 1637 ProSiteProfiles Ankyrin repeat profile. 734 766 IPR002110 GO:0005515
Eupl05g00749 1637 SMART ring_2 6 51 IPR001841 -
Eupl05g00749 1637 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 82 IPR013083 -
Eupl05g00749 1637 Pfam Protein tyrosine and serine/threonine kinase 147 433 IPR001245 GO:0004672|GO:0006468
Eupl05g00749 1637 PRINTS Ankyrin repeat signature 520 535 IPR002110 GO:0005515
Eupl05g00749 1637 PRINTS Ankyrin repeat signature 716 730 IPR002110 GO:0005515
Eupl05g00749 1637 SUPERFAMILY Ankyrin repeat 513 812 IPR036770 -
Eupl05g00749 1637 Pfam RING-type zinc-finger 6 49 IPR027370 -
Eupl05g00749 1637 SUPERFAMILY RING/U-box 5 56 - -
Eupl05g00749 1637 ProSiteProfiles Ankyrin repeat profile. 588 620 IPR002110 GO:0005515
Eupl05g00749 1637 ProSiteProfiles Zinc finger RING-type profile. 6 52 IPR001841 -
Eupl05g00749 1637 ProSiteProfiles Protein kinase domain profile. 145 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g00749 1637 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Eupl05g00749 1637 Pfam Ankyrin repeats (many copies) 591 640 IPR002110 GO:0005515
Eupl05g00749 1637 Gene3D Transferase(Phosphotransferase) domain 1 234 451 - -
Eupl05g00749 1637 Gene3D - 473 588 IPR036770 -
Eupl05g00749 1637 MobiDBLite consensus disorder prediction 92 132 - -
Eupl05g00749 1637 Gene3D - 589 733 IPR036770 -
Eupl05g00749 1637 ProSiteProfiles Ankyrin repeat profile. 519 552 IPR002110 GO:0005515
Eupl05g00749 1637 CDD RING-HC_KEG-like 3 59 - -
Eupl05g00749 1637 ProSiteProfiles Ankyrin repeat region circular profile. 519 543 - -
Eupl05g00749 1637 MobiDBLite consensus disorder prediction 92 107 - -
Eupl05g00749 1637 Gene3D - 734 864 IPR036770 -
Eupl05g00749 1637 SMART ANK_2a 767 796 IPR002110 GO:0005515
Eupl05g00749 1637 SMART ANK_2a 553 582 IPR002110 GO:0005515
Eupl05g00749 1637 SMART ANK_2a 476 508 IPR002110 GO:0005515
Eupl05g00749 1637 SMART ANK_2a 800 835 IPR002110 GO:0005515
Eupl05g00749 1637 SMART ANK_2a 588 617 IPR002110 GO:0005515
Eupl05g00749 1637 SMART ANK_2a 621 652 IPR002110 GO:0005515
Eupl05g00749 1637 SMART ANK_2a 734 763 IPR002110 GO:0005515
Eupl05g00749 1637 SMART ANK_2a 519 549 IPR002110 GO:0005515
Eupl05g00749 1637 FunFam E3 ubiquitin-protein ligase KEG 459 689 - -
Eupl05g00749 1637 FunFam E3 ubiquitin-protein ligase KEG 733 866 - -
Eupl05g00749 1637 SUPERFAMILY Protein kinase-like (PK-like) 143 447 IPR011009 -
Eupl05g00749 1637 Pfam Mind bomb SH3 repeat domain 1251 1372 IPR040847 -
Eupl05g00749 1637 Pfam Mind bomb SH3 repeat domain 999 1119 IPR040847 -
Eupl05g00749 1637 Pfam Mind bomb SH3 repeat domain 1507 1626 IPR040847 -
Eupl05g00749 1637 Pfam Mind bomb SH3 repeat domain 1378 1499 IPR040847 -
Eupl05g00749 1637 Pfam Mind bomb SH3 repeat domain 928 993 IPR040847 -
Eupl05g00749 1637 Pfam Mind bomb SH3 repeat domain 875 920 IPR040847 -
Eupl05g00749 1637 Pfam Mind bomb SH3 repeat domain 1125 1243 IPR040847 -
Eupl05g00749 1637 ProSiteProfiles Ankyrin repeat region circular profile. 734 765 - -
Eupl05g00749 1637 ProSiteProfiles Ankyrin repeat region circular profile. 767 799 - -
Eupl05g00749 1637 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 1 1631 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Eupl05g00749 1637 ProSiteProfiles Ankyrin repeat profile. 767 799 IPR002110 GO:0005515
Eupl05g00749 1637 Pfam Ankyrin repeats (3 copies) 713 798 IPR002110 GO:0005515
Eupl05g00749 1637 Pfam Ankyrin repeats (3 copies) 498 581 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00749 Eupl-Chr5 27549201 27589262 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00749 178 432 MAP Kinase Kinase Kinase AT4G18950 25.095 1.09e-14 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Eupl05g00749 PK_Tyr_Ser-Thr 6.8e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00749 K16279 - nnu:104611359 2836.21