Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00744 ATGGAGAGTGAAGAACCTAAGCAGGAAGGGGTGGAGGAAGAGAATTTAAGAAAACCAGTACTTAGTGTTGCATGTATTGGTGGTGATAGGTTGAAAAGGGATGAATGGAGCGAAGGCGCAGTTTCGAGCCTTCTCGATGTCTATGAATCCAAATGGGTCCTCCGGAACCGTGCCAAGCTCAAGGGCTATGACTGGGAAGATGTTGCGCGCCATGTATCTTCGCGTGCCAATTCTACCAAGTCACCCAAGACTCAAACACAGTGCAAGAACAAGATCGAGTCGATGAAGAAACGATATCGATCGGAGTCGGTGACAGCCGATGCTTCGTCGTGGCCTCTCTTCCCACGCCTCGATCACTTGCTCCGTTGTAAGTCTCATCCACCTCCAACTCCTCTCATGCTACTCGACCAACCACCACCACCACCACCACCACCACCTCCTACTGTAATTCAACGAGACTTGCATGAATCCAATGGTGTCCAAGTAAACAAGGAAGAGGGAGTGGCAGCAGCCAAAATTTTCGACGACGGATCAGAAAAGATCCCCATGGAGATGGATAGTAGCACACCAATCTCTGATGCCAACAAAGAGAAGTTGAAGATGAAGAAAATAAAGATGGATAAGAACCAGAGAAAGAAGAAGGGACGACGGAGTGAAGAATGGGAGATGGCGGAGAGTGTTCGATGGCTAGCAGAGGTAGTGGTAAGATCAGAGCAGGCAAGGATGGATACAATGAGGGAATTGGAGAGAATGAGAGTTGAAGCAGAGGCGAAGAAAGGAGAGATGGATCTCAAGCGAACAGAGATCATTGCCAACACACAGTTGCAGATTGCTAGGCTCCTTGTGGGCAATGGTAAAGGCATTGGTTCTTCATTGAGAATTGATTGA 888 0.482 MESEEPKQEGVEEENLRKPVLSVACIGGDRLKRDEWSEGAVSSLLDVYESKWVLRNRAKLKGYDWEDVARHVSSRANSTKSPKTQTQCKNKIESMKKRYRSESVTADASSWPLFPRLDHLLRCKSHPPPTPLMLLDQPPPPPPPPPPTVIQRDLHESNGVQVNKEEGVAAAKIFDDGSEKIPMEMDSSTPISDANKEKLKMKKIKMDKNQRKKKGRRSEEWEMAESVRWLAEVVVRSEQARMDTMRELERMRVEAEAKKGEMDLKRTEIIANTQLQIARLLVGNGKGIGSSLRID* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00744 295 FunFam Trihelix transcription factor ASIL2 36 101 - -
Eupl05g00744 295 Pfam Myb/SANT-like DNA-binding domain 33 120 IPR044822 -
Eupl05g00744 295 Gene3D - 36 101 - -
Eupl05g00744 295 Coils Coil 245 265 - -
Eupl05g00744 295 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 27 280 IPR044823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00744 Eupl-Chr5 27453729 27455173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00744 27 128 Trihelix Transcription Factor Family AT3G14180 38.679 1.36e-15 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Eupl05g00744 Myb_DNA-bind_4 7.4e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00744 - - nnu:104611355 370.933