Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00743 ATGGAAGTGAAGAGGCGAACCGCTCGGTCTCTGGTGAAGAGGCTGAGCTCCATTTCGGAGCAGACCCGAACCGAGGCGATCTGCGAACTCCGTCTCATATCCAAGCACGACCCCGATAGCCGACCCTTGATCGCTGAAGAAGGCGCTCTCCCTATGCTCATCGAAACCCTCTACTCCTCATCCCCATCCGCCCAAGAAAACGCCGCGGCCACTCTCCTCAACCTCTCCATCTCCAATCGCGAGCTTCTCATGTCCACGCGTGGCCTCCTTGACGCTATTTCCCACCTCCTCCGCCTCCCCTCCGCCACCCATGCCTCCCTCCAGACAGCTTCCGCCACCCTCTACAGCCTGCTTGTCGTCGATCACTACCGCCCTATCATCGGCGCTAAGAGAGACATCATCTTCGCCCTCATCGATATCATCCGCAACCACTATTCCCCTCCCAGATCCATCAAGGACGCTCTCAAAGCCCTCTTCGGAATCTCTCTCTACCCTCTCAACCGCGCCACCGTCGTCGAGCTGGGTGCTGTCCCCGCGCTTTTCTCCCTTGTTGTGAATGACGGTCGGATCGGGGTCGTGGAGGACGCCACCGCGGTGATTGCTCAGGTGGCTGGATGTTTCGAGAGCGGGGACGCTTTTCGGAAGGTTTCCGGAATTGGGGTTTTGATGGATTTGTTGGACCCGGCGACAGGATCGAGCAGTAGGTCGAGGGAAAATGCAGTGTCGGCGCTGTTGAATTTGGTGCAGAGCGGAGGGGAGAAGATTGTTGAGGACGTCCGGGAGATGGGTTCAGGGGCGTTGGATGGAATTGCAGATGTTGCGGAGAATGGGAGCTCCAAGGCGAAGAGCAAGGGGACTGCTTTGTTGAAAGTCCTCGATGGAGGAGGCAGCAGGGATCCACGGTTTGATTTTATTCTGAATCATTCTTCTTGA 933 0.5723 MEVKRRTARSLVKRLSSISEQTRTEAICELRLISKHDPDSRPLIAEEGALPMLIETLYSSSPSAQENAAATLLNLSISNRELLMSTRGLLDAISHLLRLPSATHASLQTASATLYSLLVVDHYRPIIGAKRDIIFALIDIIRNHYSPPRSIKDALKALFGISLYPLNRATVVELGAVPALFSLVVNDGRIGVVEDATAVIAQVAGCFESGDAFRKVSGIGVLMDLLDPATGSSSRSRENAVSALLNLVQSGGEKIVEDVREMGSGALDGIADVAENGSSKAKSKGTALLKVLDGGGSRDPRFDFILNHSS* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00743 310 PANTHER U BOX DOMAIN-CONTAINING 7 292 - -
Eupl05g00743 310 SUPERFAMILY ARM repeat 9 292 IPR016024 -
Eupl05g00743 310 SMART arm_5 164 205 IPR000225 GO:0005515
Eupl05g00743 310 SMART arm_5 37 77 IPR000225 GO:0005515
Eupl05g00743 310 SMART arm_5 206 249 IPR000225 GO:0005515
Eupl05g00743 310 Pfam Armadillo/beta-catenin-like repeat 37 76 IPR000225 GO:0005515
Eupl05g00743 310 Gene3D - 2 292 IPR011989 -
Eupl05g00743 310 FunFam ARM repeat superfamily protein 2 297 - -
Eupl05g00743 310 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 48 76 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00743 Eupl-Chr5 27440442 27441847 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00743 9 292 U-box Gene Family AT1G23030 36.014 1.90e-39 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00743 - - nnu:104611354 475.322