Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00734 ATGGAAAAAATGGCGGAATACGGAGGAGCGATCTCGGTCTCACAAGCTCGAGAGAGCCAAAGCTCAGAAGACGAAGAAAATGAGCAGAGCCCCAGAAGTGGAGCTGGTTCAGTCATGGTTCGTAGTGGAACTGGTGATCTTGGATCGTCAACAAAAGAGGTTGCTCGCAAGCCAAGGGGTCGACCTCCAGGATCCAAGAACAAACCTAAGCCACCCATCGTGATTACCAGAGACAGCGAGTCAGCCATGCGACCAGTCATTCTCGAAGTCTCTTCCGGGTCCGACATTGTCGAAATGGTCTCCCACTTCGCTCGTCGCCGCCAAGTTGGTCTCTGCGTACTCAGCGGCTCCGGCACTGTAGCCAACCTCACCCTCCGCCACCCCACCTCACACACCGCCACCCTTTCCATCACTGGCCGTTTCGAGATTCTTTCTCTCTCTGGCTCATTTCCTGCTCCCTCGTCCTCGTCCTCGTCTTCCAAGTCTCCTCCTCCTCCTCCTTTGACTATCTCTCTTGCAGGAACACAAGGTCAGGTTATTGGAGGAACTGTTGCGGGTACACTTATAGCTGCAAGCCCCGTAGTCTTAGTAGCTGCGTCGTTTGTCAATCCTTCGTTCCATAGACTTCCAGCTGACGATGAAGATGCTACGGAGGTTAAGCCCAAGCAGGGTAGCGAGTCTGTTTATAGTGTTGCAGCGCCTACCCCTTTAAATTGTCAGATTCCTCCTGATGTTTTGCCTTGGATTCCTACCTCTCGTCCTCCTCCTTACTGA 774 0.5297 MEKMAEYGGAISVSQARESQSSEDEENEQSPRSGAGSVMVRSGTGDLGSSTKEVARKPRGRPPGSKNKPKPPIVITRDSESAMRPVILEVSSGSDIVEMVSHFARRRQVGLCVLSGSGTVANLTLRHPTSHTATLSITGRFEILSLSGSFPAPSSSSSSSKSPPPPPLTISLAGTQGQVIGGTVAGTLIAASPVVLVAASFVNPSFHRLPADDEDATEVKPKQGSESVYSVAAPTPLNCQIPPDVLPWIPTSRPPPY* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00734 257 CDD DUF296 84 201 IPR005175 -
Eupl05g00734 257 MobiDBLite consensus disorder prediction 1 79 - -
Eupl05g00734 257 SUPERFAMILY AF0104/ALDC/Ptd012-like 81 221 - -
Eupl05g00734 257 Gene3D - 83 227 - -
Eupl05g00734 257 MobiDBLite consensus disorder prediction 31 49 - -
Eupl05g00734 257 ProSiteProfiles PPC domain profile profile. 80 222 IPR005175 -
Eupl05g00734 257 PIRSF ESCAROLA 3 238 IPR014476 GO:0003680
Eupl05g00734 257 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 20 225 IPR014476 GO:0003680
Eupl05g00734 257 Pfam Plants and Prokaryotes Conserved (PCC) domain 84 203 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00734 Eupl-Chr5 27257057 27258395 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00734 50 257 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 46.352 3.11e-58 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00734 - - nnu:104606060 306.605