Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00731 ATGGACATGGTGGAGGAGCAGACCAACGGAATTTGCGACCTTTCAATTCATCAACAGGTCTCTGATGATCATAAGGGGATCAAGTGTGTGACCTCGTGTGTAACAATGTCGGACAATGAGGGGTTCTGCGCGATCTGCTTGGAGAAGATACCGCTCCAAGAGACTGCTCTTGTAAAAGGTTGCGAGCATGCTTACTGTGTGACTTGCATCCTAAGATGGGCCACATACAATCAGAATCCTTCTTGCCCCCAGTGTAAGCATCCGTTTCAGTTTCTCAATGTTCATCGTTCGCTTGATGGCAGTATCCATGATTACATGTTCGAGGAGAGTGTTTGCCTACTTCTTAGAGCCGCCTGGTTCATACCTTTGACAGTGGAGGCACATGAAGAGGTGTATGGCGAACATGATGAACTCAATGATATTTATCAATATGAGGACGATGATGACGACCTAGAAGAAGTTTACTTTAGTAGTTCATCAAGTCTTCGTATTGGTAATCGGCGTTGGGGAGATAATGGCTATGTTAGGGCAGGGCGTAAAGAAGCAAGACCTGTCAATCGAGAAAATTTAGAGGACCCTGATGCTGGTCCATCTCGTTGTCCTAAGAAGAAAGAGGTTGCTAAAGATGCAACTGGACGGCGGGCAAAGAGGGCATTGAAGCGTGAAGCTGCGGATAAAGCTGCCGCAGCGAAACACCAACAGCATCTGCTACGGTTGGGACGCAAGTGA 729 0.4719 MDMVEEQTNGICDLSIHQQVSDDHKGIKCVTSCVTMSDNEGFCAICLEKIPLQETALVKGCEHAYCVTCILRWATYNQNPSCPQCKHPFQFLNVHRSLDGSIHDYMFEESVCLLLRAAWFIPLTVEAHEEVYGEHDELNDIYQYEDDDDDLEEVYFSSSSSLRIGNRRWGDNGYVRAGRKEARPVNRENLEDPDAGPSRCPKKKEVAKDATGRRAKRALKREAADKAAAAKHQQHLLRLGRK* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00731 242 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 37 102 IPR013083 -
Eupl05g00731 242 SMART ring_2 43 85 IPR001841 -
Eupl05g00731 242 Pfam Ring finger domain 43 86 IPR001841 -
Eupl05g00731 242 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 11 242 - -
Eupl05g00731 242 MobiDBLite consensus disorder prediction 185 242 - -
Eupl05g00731 242 SUPERFAMILY RING/U-box 38 92 - -
Eupl05g00731 242 ProSitePatterns Zinc finger RING-type signature. 61 70 IPR017907 -
Eupl05g00731 242 ProSiteProfiles Zinc finger RING-type profile. 43 86 IPR001841 -
Eupl05g00731 242 MobiDBLite consensus disorder prediction 185 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00731 Eupl-Chr5 27221367 27226012 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00731 2 242 C3H Transcription Factor Family AT5G19430 55.118 6.73e-83 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00731 - - ming:122062012 322.013