Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00726 ATGTTAGCTCTATCCCCTCCTTTGGTTTCAGCCTTTGGGTGGTTATTGGAAGATCAGATGAGCCATGAACAGAAGAACTGGACAGCCATTGACCCTTTCATGGACTTCAACTATAGAGAACCAGCAGCTTCAGAACTCTTTGATCACTGTTTTCCTCCGTCTCAACCGGAAACCGAGCTTGACGATGCAAGACCTTCCGGTGCGACTAGTGGCAATCCATCAACTGTTAAAAAATTGAACCATAATGCTAGTGAACGAGATCGTCGGAAGAAGTTGAATAGTTTGTACTCCACTCTCCGGTCGCTACTTCCCGGGACGGATCAAATGAAGAAATTAAGTATTCCGTCGACCATTTCTCGGGTACTAAAATACATACCAGAGCTTCAAAAGCAAGTCGAAAGGCTGATACAAAGGAAGGAAGAGATATTGTCAAGTATTTCTAAGCAAAGAGATGTCAACCATATGTCGAAGCAAAGACAAGGCGTCCTCGGACGATCTTTGCCTACTGTTTCGGCGAGTAGAGTCGACGATCGAGAAGTCGTGATTCAGATATCTACATTTAAGATCGAGAGGAGTCCACTCTCTGAGGTTTTACTAAATTTGGAGGGAGAGGGCCTTCAAATCCTTAATGCTTCAGCTTTTGCTACATATGGGAATAGGGTGTTCTACAATCTCCATCTTCAGGTGAAAGAAACACAAAGAATGGAATGTGAGGTGTTAAGCGAGAAGCTCCTCTCTTTCTATCAGAACATGGAAGAATTGTTTTAA 768 0.4336 MLALSPPLVSAFGWLLEDQMSHEQKNWTAIDPFMDFNYREPAASELFDHCFPPSQPETELDDARPSGATSGNPSTVKKLNHNASERDRRKKLNSLYSTLRSLLPGTDQMKKLSIPSTISRVLKYIPELQKQVERLIQRKEEILSSISKQRDVNHMSKQRQGVLGRSLPTVSASRVDDREVVIQISTFKIERSPLSEVLLNLEGEGLQILNASAFATYGNRVFYNLHLQVKETQRMECEVLSEKLLSFYQNMEELF* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00726 255 Gene3D - 70 160 IPR036638 GO:0046983
Eupl05g00726 255 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 73 247 - -
Eupl05g00726 255 FunFam Transcription factor ORG2 72 157 - -
Eupl05g00726 255 Coils Coil 125 145 - -
Eupl05g00726 255 Pfam Helix-loop-helix DNA-binding domain 77 129 IPR011598 GO:0046983
Eupl05g00726 255 CDD bHLH_AtORG2_like 77 153 - -
Eupl05g00726 255 MobiDBLite consensus disorder prediction 65 79 - -
Eupl05g00726 255 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 76 128 IPR011598 GO:0046983
Eupl05g00726 255 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 75 146 IPR036638 GO:0046983
Eupl05g00726 255 SMART finulus 82 134 IPR011598 GO:0046983
Eupl05g00726 255 MobiDBLite consensus disorder prediction 47 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00726 Eupl-Chr5 27122437 27124654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00726 1 255 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 43.462 2.49e-64 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl05g00726 HLH 7.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00726 - - vvi:100262373 317.39