Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00716 ATGGGCATGGCTACAGAAGCCCAATATCATGTTTTAGCAGTTGATGACAGCCTCATTGACAGAAAATTGATTGAGAGACTTCTCAAGACTTCATCTTATCAAGTTACTACAGTAGAATCTGGAAGTAAGGCTCTGGAGTTTCTGGGGTTGTATGAGGATGACCAGAGAAACTCAAACTCAAACTCAAACCCAAATCCAAACCCACCTTCTATTTCTTCAGACCACCATCAGGAAATGGAAGTGAATCTGATAATTACAGACTACTGTATGCCTGGAATGACAGGTTATGATCTACTGAAAAAAATCAAGGAATCTTCATCTCTGAAAGACATACCAGTTGTAATCATGTCTTCTGAAAATGTACCTTCAAGAATTAGCAGATGCTTAGAAGAAGGTGCAGAGGAGTTCTTTCTTAAACCTGTGCAATTATCAGATGTGAACAGGCTTCGACCCCATTTACTGAAGGGAAAATCCAGAGAACAAGAACAACCACCACAACAACAGCAACCACAACAACAACAACAACAACCACCACCACAACAACAACAACAACAACAACAACAATCACAACAACCCAACAACAAGAGAAAGGCCATGGAAGTCTTGGAAGAAGGGCTTTCACCTGAGAGGACAAGACCAAGATACAATGGCTTGACAGTGGTGTGA 666 0.4099 MGMATEAQYHVLAVDDSLIDRKLIERLLKTSSYQVTTVESGSKALEFLGLYEDDQRNSNSNSNPNPNPPSISSDHHQEMEVNLIITDYCMPGMTGYDLLKKIKESSSLKDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVQLSDVNRLRPHLLKGKSREQEQPPQQQQPQQQQQQPPPQQQQQQQQQSQQPNNKRKAMEVLEEGLSPERTRPRYNGLTVV* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00716 221 SMART REC_2 9 153 IPR001789 GO:0000160
Eupl05g00716 221 MobiDBLite consensus disorder prediction 160 196 - -
Eupl05g00716 221 Pfam Response regulator receiver domain 75 145 IPR001789 GO:0000160
Eupl05g00716 221 ProSiteProfiles Response regulatory domain profile. 10 154 IPR001789 GO:0000160
Eupl05g00716 221 CDD REC_typeA_ARR 11 149 - -
Eupl05g00716 221 Gene3D - 8 216 - -
Eupl05g00716 221 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 193 IPR045279 GO:0009736
Eupl05g00716 221 MobiDBLite consensus disorder prediction 54 74 - -
Eupl05g00716 221 MobiDBLite consensus disorder prediction 157 221 - -
Eupl05g00716 221 SUPERFAMILY CheY-like 9 187 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00716 Eupl-Chr5 26922510 26924176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00716 1 219 Response Regulator Gene Family AT3G57040 55.187 3.10e-87 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Eupl05g00716 Response_reg 2.2e-15 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00716 K14492 - nnu:104611310 294.278