Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00689 ATGGAATCCTTGCTTAGTATTTTGCTCATTACTCTTCTTTTATTTACTTCATGTTTAGTCATTGATTTCAACATTACTGTTACTCTAGATACGTCGGAAAATTTTACAACGATAAATGAAGCACTTCAATCAGCACTTAATTACAGTGATAGCCAATATTACATCCACGTTAAGGCCGATGTTTATATCGAATATGTTGAGGTGTCGACTGTTAAGAAGAACATTGCGATCACCGGCGATGGAGCTCAGAACACGAAGATTACCGGCAACCGAAGTAACGCTACCGGTTATAAAACCTATTACTCGGCGACACTCGAATATGAGACAGGAGCAGAGAAGAAGAATGTGTGGTAG 354 0.3898 MESLLSILLITLLLFTSCLVIDFNITVTLDTSENFTTINEALQSALNYSDSQYYIHVKADVYIEYVEVSTVKKNIAITGDGAQNTKITGNRSNATGYKTYYSATLEYETGAEKKNVW* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00689 117 PANTHER PECTINESTERASE 23 107 - -
Eupl05g00689 117 Pfam Pectinesterase 24 107 IPR000070 GO:0030599|GO:0042545
Eupl05g00689 117 Gene3D - 22 115 IPR012334 -
Eupl05g00689 117 SUPERFAMILY Pectin lyase-like 20 106 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00689 Eupl-Chr5 26464802 26468294 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00689 27 105 Carbohydrate Esterase AT3G43270 49.367 9.73e-18 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00689 K01051 - aew:130778800 88.5817