Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00674 ATGGTTCAGGACGAGGGATCATCTTCCGTTACTTCATCACCCCTTCAGTATTTCTCGTTGATGTCGCTTTCCCCTGGTTTAGGATCTCCTTACCCATGGCTCCGGGAGCTAAAGTCGGAGGAGCGTGGCTTGTTTCTGATCCACCTCATAGTCTCCTGTGCTAATCATGTTGCTGCTGGTAGCCTCGAGAATGCGAACATCGGGCTTGAGCAAATCTCCCACCTCGCCTCTCCTGATGGCGATACCATGCAACGAATTGCTGCATACTTCACAGAGGCGCTCGCAGACCGGATTCTCAAAGCCTGGCCTGGTTTACACAAAGCACTCAATTCCACGAGGATATCGTTGGTTTCAGAAGGACTTCTGGTTCGGAGATTGTTCTTAGAGCTCTGCCCCTTCTTAAAGCTTGCATTCGTGATCACGAACCAAGCAATCATAGAAGCCATGGAAGGGGAGAAGATGGTCCACATCATTGACCTCAATGCAGCGGAGCCTGTACAGTGGATAGCGCTCCTTCAGGCTTTGAGCGCACGGCCGGAAGGTTCACCCCATTTGAGAATTACTGGTATTCATGAACAGAAAGAGGTGTTAGAACAAACGGCTCTTCGATTGACTGAAGAAGCCGAGAAATTGGATATCCCATTTCAGTTCAATCCCATTGTTAGCAAATTAGAGAATCTTGATGTTGAAAGCCTGCGTGTTAGGACTGGAGAAGCTCTAGCAATCAGCTCTGTCCTCCAACTACATTCCCTCTTGGCATCTGATGATGAAATCCTTCGAAAGAAATCCCCACCGGTGTACAAGAATTCGAATTCTCTGCAGAGAATTGTGCAGATGAACCAGAGCACATTAGGCGAATTGCTTGAGAAAGATCTAATCAACGGGCACAGCCCGAGTCATGACTCGGCATCATCATCGCCGCTATCTTTATCTGCTTCAGCTAAGATGGAGAGCTTCCTTGCGGCTCTGTGGGGCCTATCGCCAAAGGTAATGGTGGTGGCTGAGCAAGAATCGAACCATAATGGGTCAACATTCATGGAGAGACTCTTGGAAGCACTGTACTTTTACGCAGCACTGTTTGATTGCTTGGAATCGACGGTATCAAGGGCGTCGATGGAGCGAATGAAGGTGGAGAAGATGCTGTTTGGAGAGGAGATTAAGAACATTATAGCTTGTGAGGGGGCTGAGAGGAGGGAGAGGCACGAGAAGCTTGAGAAGTGGATTCAGAGGCTTGACTTTGCTGGGTTCGGGAGGGTCCCATTGAGCTACTATGGTCTGTTGCAGGCAAGGAGGTTGTTGCAGAGCTATGGTTGTGATGGGTATAAGATCAAGGAGGAGAATGGCTGTTTGGTAATTTGCTGGCAAGATCGAGCCCTTTTTTCGGTTTCGGCTTGGACGTGTAGGAGGTATGATTGA 1416 0.488 MVQDEGSSSVTSSPLQYFSLMSLSPGLGSPYPWLRELKSEERGLFLIHLIVSCANHVAAGSLENANIGLEQISHLASPDGDTMQRIAAYFTEALADRILKAWPGLHKALNSTRISLVSEGLLVRRLFLELCPFLKLAFVITNQAIIEAMEGEKMVHIIDLNAAEPVQWIALLQALSARPEGSPHLRITGIHEQKEVLEQTALRLTEEAEKLDIPFQFNPIVSKLENLDVESLRVRTGEALAISSVLQLHSLLASDDEILRKKSPPVYKNSNSLQRIVQMNQSTLGELLEKDLINGHSPSHDSASSSPLSLSASAKMESFLAALWGLSPKVMVVAEQESNHNGSTFMERLLEALYFYAALFDCLESTVSRASMERMKVEKMLFGEEIKNIIACEGAERRERHEKLEKWIQRLDFAGFGRVPLSYYGLLQARRLLQSYGCDGYKIKEENGCLVICWQDRALFSVSAWTCRRYD* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00674 471 Pfam GRAS domain family 46 466 IPR005202 -
Eupl05g00674 471 ProSiteProfiles GRAS family profile. 37 466 IPR005202 -
Eupl05g00674 471 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 43 462 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00674 Eupl-Chr5 26287691 26290099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00674 3 469 GRAS Transcription Factor Family AT1G50420 68.410 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Eupl05g00674 GRAS 7.1e-142 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00674 - - psom:113322722 803.512