Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00671 ATGGAATTGGACGAGGTTGCGTCGATTCTGGAGGGAACAGGGGAGCCTGGTATTGCCGAGCTGTCCCAGAAGAAAACCCTCGAGCGGAAGCCGAAGAAACGGCGTCGAGGAGAGCTGAAAGGGGAAATTTGCGACGGTTCAGGTAATTCTTCTGATAACTTAATTGAAGATAGTTGTTATGGGGAGGTTTCTGAAGAAGCCCAAATGAAAGATGGTATGATTCACGAGGAATTTTCAGAAACCCTAAAGAAGGAATGTGGGTTGGATGGGAATTCGACGGAAAGTGTTCCTTCTAACGGGAATCTAAACGAAAACGTTTGCTTCGATGGGTTGAATGCAAATGTTTCGTTCGACGGACATTTGGAGAAAAATGCTTGTATTGATGTGAACTTAAAAGCAGGAGATCATTCTGTCGGATCTGCTGAAGAAACCCGAATGAAAGAACATGTCTTTAATGTGAATTTAGGTTTTCACCAAGAGACCCAGATAAAGGAATCTGGAGTTGATGGAGATTTTATGGAAATCGCTTCATTTGGAGCTGCTGAAGAAACCCAAGTGAAGGGTAGTAGTGGTTTCAACGAGCATGTGATGGAAGGTGCATTTTTGAGGACGGATGAAGGAATTCAAAATGAAGACAGGGATTTGGGTGGAGATTCGAAGGGAAATGCTTCTGGAGTTTTCGAAGTTGCCCACATAAAGGATAGTAGTAGTGCTAAGATTCACTCAAAGGCGAGCGGTTCTGATGATGGAAGTGGCTTGGGCAGCCCGGAAAAGGAAGCATATAGTTGTAAGAAAAGAAGAAAACTTTCTGAAAACTTGAAATCTACAAAAGAGACAGTGTTGAGAAGGAGCACTCGCAGAATGACATACACTGTTTCTTCTCTGAATCATGTCTCGAGCACTGAAGAATCCCCGGCAGTCAACGTTTCATCTTTCCCTAACACCAATGCTCTATCAGATTGGAAATCTGTTGACTCAGGTACTCAAGGATTGAGAGAGCAGAGCGATCTTCCTCCGAAGCTGGAACTGCCACCTTCGTCAAAAACTCTGAACGTAGATGAGATTCCTATCCTTGACCTTTTCTCTGTTTATGCGTTTTTAAGGTCATTCAGTACTTTATTATTCTTGAGTCCCTTTGACTTGGAAGCTTTTGTGGCAGCACTGAAATACAAGTTTCCTAATTCCCTAATTGATTCTATTCACTTTTCTATCTTGCAAACTCTGAAACTGCATTTGGAGTTCCTTTCTGACGAAGGCTCTCAATCTGCTTCTGATTGCCTGAGGAGTCTGAACTGGGGGTTACTGGACCTAATTACATGGCCTGTTTACATGGTTGAGTACCTATTGATTCGTGGTTTGGGATTAAAACCTGGTTTCGAGCTTAGTCGCTTGGATCTCCTCAATGGTGATTATTATAAACAGCCTCCTGCCATAAAGGTTGAGATACTTCGGTGTCTATGTGATGATGTCACCGAGGCAGAAGCCATAAGGTTGGAGCTTAATAGAAGAACACTAGCATCTGAGCTTGATATGGATGTTGATCGCATTGCGAACATCGAGACGTACAAGAAACGGAAGGAACCAATGGATGATATGGGTGGCTCTTGCTTGACTCAGGAAGTTGTTCTTGATGAAACCACTGACTGGAATAGTGATGAATGCTGTCTATGTAAGATGGATGGGAGCCTAATATGTTGTGATGGTTGCCCTGCTGCTTATCATTCAAGGTGTGTAGGGATTGCCAAGGGTCTTTTGCCGGAGGGTGACTGGTACTGCCCCGAGTGTTTGATAAACAAACATGAACTATGGATGACGTTACCAAAGTCTCTTCGAGGAGCAGAACTCTTGGGCATAGATCCTCAAGGACGGCTATATTTTGGCAGCTGTGGCTACCTGTTGGTGTCAGATTCATGTGAGACAGAATCTTCATACTATTTTTACCATAGGAATGATTTGAATGCCGTTATTGAAGTGCTAAAGTCATCGTATATTCTTTATGGTGGCATTATAAGTGCAATCTCCACGAACTGGGGCATTCCTGTTGATTCAACTGGAGCAAAAGGTTATTCAGCCTCTCAGACCCATACTATATACACAGACTTGGATGTGGAAGGTCAAATCTCTGCTATTGGTTTGTCTTCTCTACCACATTCAGATATGGACGGAGTTAAAGGTGAGGCCATTGATGAAAGGAAACCAAGTAAAATCTCATTTATAACTGAAGGTTTGGATCATCCAATCTGTAAGGTTTCAGAGTCTGTTAGAAGGTTCGATTCAGCAACCATGAACCAGTTTACGGAGATCGCAAGTCCTTTTGCAAGCTCTGAAGGCTCCACCGAAATCTCACAAGCTGCCACAGGCATTCAAATGTCTCACAAAACTGGAGCAAATTGTTCCAATAGATATGCTGGAACTGCAAATGAGTCTGAAATCCCAGAGAAAAATCATTCCACTGCGGGGGAATATTTTTTGATGCCAAATGATTCTAATGTTAAACAAGAAAATAATATAGGATCTGCAGTTCCTGGCCGTACATCGTCTGTAATGAACTCAGGCAAAGGGGCGGCATCACAAATGCAGTTTGAACCTGGTTATTATGTTAACCATTACAGTTTCGCTCAGACAGCTGCATCCGTGGCTGAAGAGTTAATGCGTAAATCATCAGACAGCATAAACAAGGACTCTAAAAGATCTGATGAGGAGATAATTACAGCACAGATGAAAGCCATCTCTAAGAATTCGACAAACTTTTGTTGGTCAAATATTCAGAGGTTACATATGGATGCACAGAAAGAAAATTGTGGGTGGTGTTTCTTTTGCAAAAGTCCCAACGACAGTAGTGATTGCTTATTTAACATGACTGAGAAGAAGCTCGCTCCAGAAGGTTCTAAAAGTGGGGCAGTTGGCTCTTGTATTAAAAGAAATAGAAAAAGCCATCTAAGTGCTGTCATATTTCATATTCTCTCCATTGAAGAGCGCTTGTCCGGACTTCTTTCAGGTCCATGGCATAATCCACATTATAGCAAGAACTGGCGTAAAAGTGTTCTTAAGGCATCAGATGTTGCATCATTGAAACATCTGCTACTTACTTTAGAGTCAAATTTGCGTCGTGTTGCACTTTCGGCAGAGTGGTTGAAACAGGTGGATTCTATTGTTACTATGGGATCGGCTTCTCATGTCTCGACCAGAGCTCAGGTATCTTATTCAAAGCATGGGGGCGGCAGAAAGCGCACCAAATTTTCAGATGCTGAGTCCAATTGTGCTACAAATGCTGCTACCAGATCAGGTATATTCTGGTGGAGGGGTGGAAGGATTTCACGTCAACTGTTCCACTGGAAGGTCTTGCCTCGCTTCTTGGCTCTAAAGGGTGCTCGACAAGCTGGGTGTATTAAGATACCTGGTATATTGTATCCTGAAAGTTCAGAGTTTGCTAAGAGAAGTAAATATATTGCTTGGAGAGCTGCTGTTGAGATGTCAACAAGCGTGACACAGTTTGCTTGCCAGGTTAGAGAGCTTGACACAAATATTAGGTGGGACGACCTTGAAAATAGTCAAGTTTTTTCTCAGTTGGCCAAGGAATCTAGGAAATTAATGAGGCCATTCAAGAAGGTGATTATCCGCAGGAAATGCATAGAAGGAACAAATGTGAAGTATCTTCTTGATTTTGGCAAGAGAAAAATTATACCTGATACTGTTATCCGACATGGAGTCATGCTCGAAGTATCCGCTAGTGAAAGAAAGAAATATTGGCTGGATGAATCTCATGTTCCTTTGAATCTCTTGAAGGCTTTTGAAGAGAAAAAATTAGTTCGCATGTCCAATAAGACAAATACTGCGCCTCTTCATGAGGGTGGCGAAGTAATGAAGAATCCCTCCAAAAAAAGGGGGCTTTCATACCTTTTGTCAAAAGGAGAAAAATCTGAGACGTACCAGTGTGGTCACTGTAACCAAGATGTGCTGGTCAGGGAGGCTGTGAACTGCCAGGATTGCAAAGGGTTTTTCCATTTAAAGCATTTCAGGAAGTCTAAAGGTTCCATCACTTCTGAATGTACATATAAATGCCACAAATGCCAGAACAAGAAGCATGTGAAGAAAACTGTGAAAATAAAAACGAAAAAGGGGAAATTACGGTTACAGAAGAGTAAAAAAGCCTCCACAGTTGTACGGCCAAGACGTTTAGCAAAGAAAGTGAAATACGGGTCACCACCGTGTAAAAATCGTGGTGGAGCCAAGAAAGGGAAACAGGTTCAATCTAAAAAAGGGACATCTAAGAAATCTAAGAAAAGGATTTGTTGGCATAAGGAGAAGAGAACACATGTTTATCATGCTTACTGGCTAAATGGTCTTCTGTTGACTAGAAAGCCAAGTGATGCACGTGTGACGCATTTTAGAGAAAGAAATCTTCTTCTGCCATCTGAACACTCAAATGCCCTCTTTATGCAACCCATATGCTGTCTTTGCTGTGAAGCAGGATATACGTCCAGATTAATCTATGTCAGATGTGACAGCTGCCAAGAATGGTTTCATGGAGATGCCTTTGGGCTTGCTGTGGAAAATAGCTGTAACATCATTGGATTCCGATGCCACAGATGCCGTAAGAGGAACCCTCCTGTGTGCCCATATTTGCAGGATGCAGTAGATAATGAAATCCAATTGCGCATGGAGAAAAATAATGCTGGGATTGAGTGTGTTAAAGAAGTACCTGAAATTGACAAATTTCTGACTGAGAAATTTGAAGAACATAGATTTCCTAAAAATGAATGTTCTCAGGGTTCAATGCATAGATACAAGTCTGTTCCAAAGGAGCAGAAAGCAGATACAATACCAGATTCTATTCTCGAGGGCCAGAAAGCATGTCAAAGTCCAGATTCTCAGCATAAGGAGCAGAAAGCAGATGAAATTCCATATTATAATCAGTCTCTTCTGTTGAAGGATTGTAAAATCGAATCAGAAAAGGATCTTGAGTCTTCTCATAAGGAGCATAAAGTTGATGTTATTCTGGATTCTATTTATAAGGACCAGAAAGCCGATGCGATTCCAGATTCTAATCAAACTTGTAAGTTGGAAGAGGTTGAAGTTGAATCAAGAAAGAGTCATATTATTGCTGTTGGATCGCTTTCTGAAGCAAGATATCCATCTTGCAAATCTGATGAGGATGCAGTAGAAACAGGATTGAAGGTGTTGGAACATCATAAGGTGAAAGATGGTTTGGAAGAGACAACAGGTTTCCCAGAGTTGCTGGTTCCCGAAACTCATGGTGTGTCCACTGAGTTGCATCCTCAAATAACTCTGTCACTAACTGAATTATTAGATACAGGAGTAGAGAAAGTATAG 5334 0.4175 MELDEVASILEGTGEPGIAELSQKKTLERKPKKRRRGELKGEICDGSGNSSDNLIEDSCYGEVSEEAQMKDGMIHEEFSETLKKECGLDGNSTESVPSNGNLNENVCFDGLNANVSFDGHLEKNACIDVNLKAGDHSVGSAEETRMKEHVFNVNLGFHQETQIKESGVDGDFMEIASFGAAEETQVKGSSGFNEHVMEGAFLRTDEGIQNEDRDLGGDSKGNASGVFEVAHIKDSSSAKIHSKASGSDDGSGLGSPEKEAYSCKKRRKLSENLKSTKETVLRRSTRRMTYTVSSLNHVSSTEESPAVNVSSFPNTNALSDWKSVDSGTQGLREQSDLPPKLELPPSSKTLNVDEIPILDLFSVYAFLRSFSTLLFLSPFDLEAFVAALKYKFPNSLIDSIHFSILQTLKLHLEFLSDEGSQSASDCLRSLNWGLLDLITWPVYMVEYLLIRGLGLKPGFELSRLDLLNGDYYKQPPAIKVEILRCLCDDVTEAEAIRLELNRRTLASELDMDVDRIANIETYKKRKEPMDDMGGSCLTQEVVLDETTDWNSDECCLCKMDGSLICCDGCPAAYHSRCVGIAKGLLPEGDWYCPECLINKHELWMTLPKSLRGAELLGIDPQGRLYFGSCGYLLVSDSCETESSYYFYHRNDLNAVIEVLKSSYILYGGIISAISTNWGIPVDSTGAKGYSASQTHTIYTDLDVEGQISAIGLSSLPHSDMDGVKGEAIDERKPSKISFITEGLDHPICKVSESVRRFDSATMNQFTEIASPFASSEGSTEISQAATGIQMSHKTGANCSNRYAGTANESEIPEKNHSTAGEYFLMPNDSNVKQENNIGSAVPGRTSSVMNSGKGAASQMQFEPGYYVNHYSFAQTAASVAEELMRKSSDSINKDSKRSDEEIITAQMKAISKNSTNFCWSNIQRLHMDAQKENCGWCFFCKSPNDSSDCLFNMTEKKLAPEGSKSGAVGSCIKRNRKSHLSAVIFHILSIEERLSGLLSGPWHNPHYSKNWRKSVLKASDVASLKHLLLTLESNLRRVALSAEWLKQVDSIVTMGSASHVSTRAQVSYSKHGGGRKRTKFSDAESNCATNAATRSGIFWWRGGRISRQLFHWKVLPRFLALKGARQAGCIKIPGILYPESSEFAKRSKYIAWRAAVEMSTSVTQFACQVRELDTNIRWDDLENSQVFSQLAKESRKLMRPFKKVIIRRKCIEGTNVKYLLDFGKRKIIPDTVIRHGVMLEVSASERKKYWLDESHVPLNLLKAFEEKKLVRMSNKTNTAPLHEGGEVMKNPSKKRGLSYLLSKGEKSETYQCGHCNQDVLVREAVNCQDCKGFFHLKHFRKSKGSITSECTYKCHKCQNKKHVKKTVKIKTKKGKLRLQKSKKASTVVRPRRLAKKVKYGSPPCKNRGGAKKGKQVQSKKGTSKKSKKRICWHKEKRTHVYHAYWLNGLLLTRKPSDARVTHFRERNLLLPSEHSNALFMQPICCLCCEAGYTSRLIYVRCDSCQEWFHGDAFGLAVENSCNIIGFRCHRCRKRNPPVCPYLQDAVDNEIQLRMEKNNAGIECVKEVPEIDKFLTEKFEEHRFPKNECSQGSMHRYKSVPKEQKADTIPDSILEGQKACQSPDSQHKEQKADEIPYYNQSLLLKDCKIESEKDLESSHKEHKVDVILDSIYKDQKADAIPDSNQTCKLEEVEVESRKSHIIAVGSLSEARYPSCKSDEDAVETGLKVLEHHKVKDGLEETTGFPELLVPETHGVSTELHPQITLSLTELLDTGVEKV* 1778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00671 1777 MobiDBLite consensus disorder prediction 323 342 - -
Eupl05g00671 1777 MobiDBLite consensus disorder prediction 1 49 - -
Eupl05g00671 1777 ProSitePatterns Zinc finger PHD-type signature. 554 595 IPR019786 -
Eupl05g00671 1777 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1480 1538 IPR013083 -
Eupl05g00671 1777 MobiDBLite consensus disorder prediction 237 268 - -
Eupl05g00671 1777 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 542 613 IPR013083 -
Eupl05g00671 1777 SMART PHD_3 1483 1532 IPR001965 -
Eupl05g00671 1777 SMART PHD_3 553 596 IPR001965 -
Eupl05g00671 1777 SUPERFAMILY FYVE/PHD zinc finger 1475 1534 IPR011011 -
Eupl05g00671 1777 CDD PHD_SF 1483 1531 - -
Eupl05g00671 1777 Pfam PHD-finger 554 596 IPR019787 -
Eupl05g00671 1777 MobiDBLite consensus disorder prediction 1398 1428 - -
Eupl05g00671 1777 Pfam DDT domain 358 408 IPR018501 -
Eupl05g00671 1777 ProSiteProfiles DDT domain profile. 354 414 IPR018501 -
Eupl05g00671 1777 ProSiteProfiles Zinc finger PHD-type profile. 551 598 IPR019787 -
Eupl05g00671 1777 PANTHER PHD FINGER FAMILY PROTEIN 2 1594 - -
Eupl05g00671 1777 SMART testlast3 354 414 IPR018501 -
Eupl05g00671 1777 MobiDBLite consensus disorder prediction 1412 1428 - -
Eupl05g00671 1777 SUPERFAMILY FYVE/PHD zinc finger 540 598 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00671 Eupl-Chr5 26188195 26230677 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00671 2 1543 PHD Transcription Factor Family AT5G12400 38.089 0.0 967
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Eupl05g00671 DDT 2.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00671 - - ming:122089966 1699.1