Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00623 ATGGAGAGGTACTTGAGAGAAAATTTCGAAGTTGAAGCCAAAAATCCCTCCGAAGATGCTCAAAGGAGATGGAGATCCGCGGTTTCGGTCGTGAAGAATCCTCGAAGGAGGTTTCGAATGGTCGCAGATCTGGCCAAGAGAAAGGCAGCCGAAGAGAAGAGGACTAAAATCAAGGATAAAATACGTGTCGCTCTATTTGTTCAAAAAGCAGCCCTCCAATTCATCGATGCTGTTAAAAAAGTTGACTACACGCTCTCGGTAGAGGCTAGAGAGGCCGATTTCGGCATTCACCCAGATGAGCTTGCATCCATTGTCCGAGGCCATGATCCCGATGGTTTGAAACATCATGATGGAGTCGAAGGCATTGCGAGAAAAGTCCGTGTCTTGCTCAACGACGGTGTGAATGGAAGTGACATACCTCTCAGGCAGAAGATCTACGGATTCAACCAATATGTTGAAAAACCTCCTAGAAGTTTCTTGACATTTGTATGGGAAGCGCTGCATGATTTAACTCTAATCATCCTTATGGTCTGTGCAGTGGCTTCTATAGGCGTTGGAATTCCCACCGAAGGGTGGCCAGAAGGTATGTACGATGGGTTGGGAATCATACTCAGCATTTTCTTGGTAGTCATGGTTACTGCAATCAGTGACTACAAGCAGTCCTTGCAATTCAGGGACTTGGACAAGGAGAAGAAGAAGATTTTTGTTCAGGTCACTAGGAATGGATTCAGACAGGAAGTCTTAATCTATGATTTGGTGGTTGGAGATATCGTTCATCTCTCCATTGGAGACCAAGTTCCAGCTGATGGGCTTTTTATATCAGGTTATAGCTTGTTGATTGATGAGTCAAGCTTGTCAGGGGAGAGTGAGCCTGTGAATGTAAACCAGGAGAATCCTTTTCTTCTATCAGGGACCAAAGTGCAAGATGGGTTTGGTAAGATGCTGGTGACTTCAGTTGGAATGAGGACTGAATGGGGACAGTTGATGGAGACTCTGAGTGAGGGGGGAGAAGATGAAACACCACTGCAGGTGAAACTTAATGGTGTTGCGACTATTATTGGGAAGATTGGTTTGTTTTTTGCCATTCTGACATTTCTGGTTCTGATGGTGAGGTTTCTGGTGGAGAAGGCACTTCAGCACAAATTCTCGGAATGGTCTTCGGATGATGCATTGACGCTCCTCAATTATTTCGCAATTGCAGTGACTATAATCGTGGTCGCAGTTCCGGAAGGACTACCGTTGGCAGTGACGCTGAGTCTTGCCTTTGCAATGAGGAAACTAATGAATGATAGGGCACTTGTTAGGCATCTCTCGGCATGTGAGACCATGGGTTCTGCCACTTGCATTTGCACAGATAAAACAGGGACATTGACGACCAACCATATGGTGGTTGATAAAATATGGAGTGGCGAAGAAACTAAAGTGATAAAAGGCAAAGACGGTGGAGATATTTTGAAATGTGCGATGTCTGAGAGAGTTTCGAGCATTCTTATGCAGTCCATATTCCAAAATACTGGTTCTGAGGTAGTAAAAGACAAAGACGGAAAGAATACCATTTTGGGTACTCCAACAGAATCAGCATTGTTAGAATTTGGCTTGCTTTTGGGGGGTGACTTTGAAGCCCAACGTCGGGAGTCTAAGATAGTGAAGGTTGAGCCTTTCAATTCAGTCAGGAAGAAGATGTCCGTGCTTTTGGCTCTTCCAACTGGTAGGTTTCGAGCGTTCTGCAAAGGTGCATCAGAGATCGTCCTACAAATGTGCGACAAGATTTTAAATAGCAATGGAGAACCCGTTCCTATGTCGGAAGCACAGATAAAGAATGTCATGGATATCATAAATGGTTTTGCCAGTGAAGCCTTGAGAACTCTCTGCTTGGCTTTCAAGGATATGGATGAGACTTCCCACACAGAAAGCATTCCTGCTGAAGGCTATACACTGATCGCAGTTGTTGGAATTAAGGATCCAGTGCGCCCTGGAGTCAAGGATGCAGTTCAGACTTGTTTAGCTGCTGGGATTACTGTTAGAATGGTCACGGGAGACAATATTTATACAGCTAAAGCCATAGCTAAAGAATGTGGCATATTGACGGATGATGGTTTGGCCATAGAAGGATCAGATTTTCGTAGTAAGAGTCCCCAGGAGATGAAGGAGTTGATACCAAAAATTCAGGTAATGGCTCGATCCTTGCCTTTGGACAAACACACCTTGGTGACCCAGTTGAGGAATATGTTCAGAGAAGTTGTCGCGGTGACTGGTGATGGGACCAATGATGCTCCTGCTCTGCATGAAGCAGACATTGGACTTGCTATGGGCATAGCAGGAACAGAGGTCGCAAAAGAGAATGCCGATGTCATCATATTGGATGATAATTTTGCAACTATTTTGACTGTGGCCAAATGGGGCCGTGCAGTTTATATAAACATTCAAAAGTTTGTGCAGTTCCAGTTGACAGTTAATGTTGTTGCTCTTATGATCAATTTTATTTCAGCATGCCTCTCAGGATCTGCTCCTCTTACCGCCGTCCAGTTGCTGTGGGTCAACATGATTATGGACACTCTTGGTGCGTTGGCGCTAGCTACAGAACCGCCAAATGATGGACTGATGAAAAGACCTCCGGTTGGGAGGGGTGTGAATTTCATCACCAGGACTATGTGGAGAAATATCATTGGTCAGAGCATTTATCAATTGGCCATCCTTTTAGCTCTCACCTTTGACGGGAAGCGGCTTCTGAAACTTAGTGGTTCAGATGCTAGTTCTGTTCTCAATACTTTCATTTTCAATACTTTTGTGTTTTGCCAGGTATTCAACGAAATAAACAGCCGTGATATGGAGAAGATAAACGTTTTCCGTGGCATGTTCGACAGCTGGGTCTTCATAGCTGTGATGGTCTCCACAGTGGTGTTCCAAATAATAATAGTTGAGTTCCTGGGCACTTTTGCAAGCACAGTGCCTCTGAGCTGGCAATTATGGTTACTCGGCATCCTCATCGGATCTGTAAGCTTGGTCATCTCAGTTGTCATAAAGTGCATCCCTGTTGAACCGGCCAAGGATACAGCCACTGGCAATCATCATGATGGTTATGAGGCACTCCCTAGTGGTGAAGAGGAAGTGTAA 3114 0.4483 MERYLRENFEVEAKNPSEDAQRRWRSAVSVVKNPRRRFRMVADLAKRKAAEEKRTKIKDKIRVALFVQKAALQFIDAVKKVDYTLSVEAREADFGIHPDELASIVRGHDPDGLKHHDGVEGIARKVRVLLNDGVNGSDIPLRQKIYGFNQYVEKPPRSFLTFVWEALHDLTLIILMVCAVASIGVGIPTEGWPEGMYDGLGIILSIFLVVMVTAISDYKQSLQFRDLDKEKKKIFVQVTRNGFRQEVLIYDLVVGDIVHLSIGDQVPADGLFISGYSLLIDESSLSGESEPVNVNQENPFLLSGTKVQDGFGKMLVTSVGMRTEWGQLMETLSEGGEDETPLQVKLNGVATIIGKIGLFFAILTFLVLMVRFLVEKALQHKFSEWSSDDALTLLNYFAIAVTIIVVAVPEGLPLAVTLSLAFAMRKLMNDRALVRHLSACETMGSATCICTDKTGTLTTNHMVVDKIWSGEETKVIKGKDGGDILKCAMSERVSSILMQSIFQNTGSEVVKDKDGKNTILGTPTESALLEFGLLLGGDFEAQRRESKIVKVEPFNSVRKKMSVLLALPTGRFRAFCKGASEIVLQMCDKILNSNGEPVPMSEAQIKNVMDIINGFASEALRTLCLAFKDMDETSHTESIPAEGYTLIAVVGIKDPVRPGVKDAVQTCLAAGITVRMVTGDNIYTAKAIAKECGILTDDGLAIEGSDFRSKSPQEMKELIPKIQVMARSLPLDKHTLVTQLRNMFREVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIILDDNFATILTVAKWGRAVYINIQKFVQFQLTVNVVALMINFISACLSGSAPLTAVQLLWVNMIMDTLGALALATEPPNDGLMKRPPVGRGVNFITRTMWRNIIGQSIYQLAILLALTFDGKRLLKLSGSDASSVLNTFIFNTFVFCQVFNEINSRDMEKINVFRGMFDSWVFIAVMVSTVVFQIIIVEFLGTFASTVPLSWQLWLLGILIGSVSLVISVVIKCIPVEPAKDTATGNHHDGYEALPSGEEEV* 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00623 1037 SFLD p-type atpase 432 803 IPR044492 -
Eupl05g00623 1037 Gene3D - 137 333 - -
Eupl05g00623 1037 PRINTS H+-transporting ATPase (proton pump) signature 608 626 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl05g00623 1037 PRINTS H+-transporting ATPase (proton pump) signature 783 808 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl05g00623 1037 PRINTS H+-transporting ATPase (proton pump) signature 751 767 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl05g00623 1037 SMART Cation_ATPase_N_a_2 113 187 IPR004014 -
Eupl05g00623 1037 Pfam Cation transporting ATPase, C-terminus 836 1009 IPR006068 -
Eupl05g00623 1037 Gene3D - 460 655 IPR023299 GO:0000166
Eupl05g00623 1037 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 456 660 IPR023299 GO:0000166
Eupl05g00623 1037 NCBIfam HAD-IC family P-type ATPase 547 696 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl05g00623 1037 NCBIfam HAD-IC family P-type ATPase 721 838 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl05g00623 1037 NCBIfam HAD-IC family P-type ATPase 202 475 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl05g00623 1037 Gene3D - 165 1010 - -
Eupl05g00623 1037 Gene3D - 447 796 IPR023214 -
Eupl05g00623 1037 SFLD C1.7: P-type atpase like 432 803 - -
Eupl05g00623 1037 SUPERFAMILY Calcium ATPase, transduction domain A 235 331 IPR008250 -
Eupl05g00623 1037 FunFam Calcium-transporting ATPase 460 655 - -
Eupl05g00623 1037 PRINTS P-type cation-transporting ATPase superfamily signature 450 464 - -
Eupl05g00623 1037 PRINTS P-type cation-transporting ATPase superfamily signature 670 680 - -
Eupl05g00623 1037 PRINTS P-type cation-transporting ATPase superfamily signature 751 770 - -
Eupl05g00623 1037 PRINTS P-type cation-transporting ATPase superfamily signature 648 659 - -
Eupl05g00623 1037 PRINTS P-type cation-transporting ATPase superfamily signature 281 295 - -
Eupl05g00623 1037 PRINTS P-type cation-transporting ATPase superfamily signature 775 787 - -
Eupl05g00623 1037 FunFam Calcium-transporting ATPase 768 1014 - -
Eupl05g00623 1037 SUPERFAMILY HAD-like 449 856 IPR036412 -
Eupl05g00623 1037 FunFam Calcium-transporting ATPase 648 796 - -
Eupl05g00623 1037 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 48 IPR024750 GO:0005516
Eupl05g00623 1037 SUPERFAMILY Calcium ATPase, transmembrane domain M 115 1012 IPR023298 -
Eupl05g00623 1037 FunFam Calcium-transporting ATPase 16 76 - -
Eupl05g00623 1037 CDD P-type_ATPase_Ca_PMCA-like 142 884 - -
Eupl05g00623 1037 FunFam Calcium-transporting ATPase 211 333 - -
Eupl05g00623 1037 NCBIfam calcium-translocating P-type ATPase, PMCA-type 116 1013 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Eupl05g00623 1037 PANTHER CATION TRANSPORTING ATPASE 71 1012 - -
Eupl05g00623 1037 Pfam Cation transporter/ATPase, N-terminus 115 182 IPR004014 -
Eupl05g00623 1037 Pfam E1-E2 ATPase 235 428 - -
Eupl05g00623 1037 Pfam Cation transport ATPase (P-type) 511 590 - -
Eupl05g00623 1037 ProSitePatterns E1-E2 ATPases phosphorylation site. 452 458 IPR018303 -
Eupl05g00623 1037 Gene3D - 16 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00623 Eupl-Chr5 24723551 24767497 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00623 57 1033 Primary Pumps ATPases AT3G57330 74.002 0.0 1482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00623 K01537 - psom:113309476 1610.51