Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00620 ATGGATGATGGAGAGGTAGAGCACCAAGTCCGTTCATCGAATCCACCCGACATCTCCAGTGAATTTCATAGATCGACATCCGTAGACTCGTTTCTTGATGAATTATTGAAGAACACAAGGACATGTACTCACACACACACCTGCAACCCCCCTGGCCCAGACGCAGCGCACACGCACACTTGTTACCACACACACACCCAAGTCTTCGCGAGCGAAGATGATGATGGGCCAAGTGATAAACAACAGTCTGCTTCGAAATCTAAAAGGCCATCAGGAAACAGAGAAGCGGTTCGGAAGTATAGAGAGAAGAAGAAGGCACACACAGCTTACTTGGAAGAGGAAGTTAAGAAATTGCGCCTCCTGAATCAACAACTAATCAGGAGATTACAGGGGCAGACATTGCTTGAAGCTGAGGTTCTCAGGCTGAGAAGCCTTTTGTTAGATCTTAGAGGAAAGATTGATCACGAATTAGGCGATTTCCCTTTCCAAAAGCAGTGCAATTCTACTACTAGTTTCAAGGAAGGGGATTGTGGGGTCCAGTCTTTTGGTGCAGAGATTGGTCTTCGTTGTGAGACCGATGTCCCATGCCCCCATCAGGCTGTTGGATCATCATTGCAAGCTGGCATTGGTGGAAGCATGAAGGCAACAGTCACTTGGGAAGGTAACTGCGAGCCTGCGATCGTCGACTGTCAGGCACACCCAAATGGAGCTGTTGGGCAAAACTTGGCAAGTGCAGAAGCTCACCTCAATTGCCTGATGCCAAACGCCATGGACACGGAGAGGACATTGGTCTCATCTACATCTCAAGCCGAATAA 816 0.4841 MDDGEVEHQVRSSNPPDISSEFHRSTSVDSFLDELLKNTRTCTHTHTCNPPGPDAAHTHTCYHTHTQVFASEDDDGPSDKQQSASKSKRPSGNREAVRKYREKKKAHTAYLEEEVKKLRLLNQQLIRRLQGQTLLEAEVLRLRSLLLDLRGKIDHELGDFPFQKQCNSTTSFKEGDCGVQSFGAEIGLRCETDVPCPHQAVGSSLQAGIGGSMKATVTWEGNCEPAIVDCQAHPNGAVGQNLASAEAHLNCLMPNAMDTERTLVSSTSQAE* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00620 271 SMART brlzneu 81 148 IPR004827 GO:0003700|GO:0006355
Eupl05g00620 271 SUPERFAMILY Leucine zipper domain 87 131 IPR046347 GO:0003700|GO:0006355
Eupl05g00620 271 CDD bZIP 86 139 - -
Eupl05g00620 271 Gene3D - 74 149 - -
Eupl05g00620 271 Pfam Basic region leucine zipper 84 138 IPR004827 GO:0003700|GO:0006355
Eupl05g00620 271 PANTHER CCAAT/ENHANCER BINDING PROTEIN 2 161 IPR031106 GO:0003700|GO:0006351
Eupl05g00620 271 MobiDBLite consensus disorder prediction 69 103 - -
Eupl05g00620 271 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00620 Eupl-Chr5 24669074 24671414 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00620 1 164 bZIP Transcription Factor Family AT2G16770 56.707 3.85e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Eupl05g00620 bZIP_2 1.3e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00620 K25785 - nnu:104613430 357.066