Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00617 ATGATTGTTATAATTCTGTGTTTTTCTTTTCCCAAAAAGATTGCGGATTTTGATAATTTTAAGTTCATGCAGTCTACTCTCCATGGCTTTGATGATGAGGATTGTGTCAAGATTTTAAACAAATGCAAGGAAGCGATAAATTCAACTGGAGGGAAGGTGATCCTGATAGAGATTGTAGTCGACACAGAGAACGTACCAGAGTTATCAAGTGCAAGATTATGTATGGACATGGAAATGATGATGATGGGAGGAAAAGAAAGAACAAAGGAGCAATGGAAAAATCTCTTAAACAAAGCTGGTTTTAGTCACTATAAGATAATACCCATCTTGGCCATGGAATCTATTATTGTGGCTTATCCTCAATCTTTCTCCTATGAATTGCTTCCCATTAATCTGCGCATCTAG 405 0.3654 MIVIILCFSFPKKIADFDNFKFMQSTLHGFDDEDCVKILNKCKEAINSTGGKVILIEIVVDTENVPELSSARLCMDMEMMMMGGKERTKEQWKNLLNKAGFSHYKIIPILAMESIIVAYPQSFSYELLPINLRI* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00617 134 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 120 IPR016461 GO:0008168
Eupl05g00617 134 Pfam O-methyltransferase domain 22 102 IPR001077 GO:0008171
Eupl05g00617 134 PANTHER O-METHYLTRANSFERASE 22 105 IPR016461 GO:0008168
Eupl05g00617 134 Gene3D Vaccinia Virus protein VP39 7 121 IPR029063 -
Eupl05g00617 134 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 22 118 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00617 Eupl-Chr5 24635382 24635786 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00617 22 121 Monolignol Biosynthesis Gene Families AT1G51990 41.905 8.78e-14 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00617 - K22588 ag:BAC22084 129.413