Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00615 ATGGAAGGCCTAGTGAGAGACCAGAAACAAGTTGAGGAAGAAAGCATGAGAGCTCAAGCTCAGTTGTGGAAATACATTTATGGATATGCCGACTCCTTGACACTTAAATGCGCGCTTAAGCTCGGAATCCCTGACATAATCGACAAGCATAATGGACCCATGACCTTACATGAGCTTGCCGACAGCCTCCAGTTAGAGTCCGTAAATGTGGATCGCTTATTCCGGTCGATGCGTTACTTAGTGCACATGAAGCTCTTTGTGATCACTGCAGATGAGGATGGGGAGAAGTATGGGCTAACTCCGGCGTCAAAACTCTTAGTGAAAGGGGAAGAGATGTGCTTGGCCTCTTATGCATGGTTGCAGCTAGGCCCTGATGTGTTTTCAATTTGGCAACACTTGATCGATGGCTTCAATGTATCGACGACGCCTTGGGTGGCATGCTTTGGGGAGTCATGCTACGAGACACTTGTGGAGGACTTGGAGAATAGGAAGCTCTTCAATAATGCGATGATGGACTATTCGATCTGCGTGATCCCAGCATTCTTGCGGGGGTGCATCAATGAGGGGTTGCTTGAAGGAGTGAAGTCACTTGTTGACGTCGGGGGTAACTCGGGAGTTGTTTCGAAGGCGATAGTTAACGCCTTCCAACATGTGAAATGTACTGTTCTGGATTTACCTCACATCATAGAGAGTGTTCCACAGGATCCCAAGCTAAATTTTGTGGCAGGAGACATGTTTGCCTTCGTACCCAATGCTGATGCGGTGTTAATGAAGTCTACTCTCCATAACTTTGACGATGAGGATTGTGTCAAGATTTTAAACAAATGCAAGGAAGCGATAAATTCAACTGGAGGGAAGGTGATCCTGGTCGAGATTGTAGTCGACACAGAGAACGTACCAGAGTTATCCAGTGCAAGATTATGCATGGACATGGAAATGATGATGATGGGAGGAAAAGAAAGAACAAAGGAGCAATGGGAAAATCTCTTAAACAAAGCTGGTTTTAGTCATCATAAGATATTACCCATCATGGCCATGGAATCTATTATTGTGGCATATCCTTAA 1065 0.4535 MEGLVRDQKQVEEESMRAQAQLWKYIYGYADSLTLKCALKLGIPDIIDKHNGPMTLHELADSLQLESVNVDRLFRSMRYLVHMKLFVITADEDGEKYGLTPASKLLVKGEEMCLASYAWLQLGPDVFSIWQHLIDGFNVSTTPWVACFGESCYETLVEDLENRKLFNNAMMDYSICVIPAFLRGCINEGLLEGVKSLVDVGGNSGVVSKAIVNAFQHVKCTVLDLPHIIESVPQDPKLNFVAGDMFAFVPNADAVLMKSTLHNFDDEDCVKILNKCKEAINSTGGKVILVEIVVDTENVPELSSARLCMDMEMMMMGGKERTKEQWENLLNKAGFSHHKILPIMAMESIIVAYP* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00615 354 Pfam O-methyltransferase domain 130 336 IPR001077 GO:0008171
Eupl05g00615 354 PIRSF O-mtase 4 354 IPR016461 GO:0008168
Eupl05g00615 354 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 23 354 IPR016461 GO:0008168
Eupl05g00615 354 Coils Coil 1 21 - -
Eupl05g00615 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 352 IPR029063 -
Eupl05g00615 354 Gene3D - 5 106 IPR036388 -
Eupl05g00615 354 PANTHER O-METHYLTRANSFERASE 16 335 IPR016461 GO:0008168
Eupl05g00615 354 Pfam Dimerisation domain 34 81 IPR012967 GO:0046983
Eupl05g00615 354 SUPERFAMILY "Winged helix" DNA-binding domain 11 110 IPR036390 -
Eupl05g00615 354 Gene3D Vaccinia Virus protein VP39 107 354 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00615 Eupl-Chr5 24629497 24630764 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00615 33 341 Monolignol Biosynthesis Gene Families AT5G54160 33.125 2.89e-44 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00615 - K22588 ag:BAC22084 371.318