Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00611 ATGGGATATCTCTCTTGTAGAGCCGAATCCGCCATCGCCACCACCACCACCACCACCACCACCACCAAAGCCAAGAAAAGCAAGAACAAGGAAGAACTAGAGAAACCCATCAAAGTACAACAATTCCAATACAGAGATCTTGAAGCAGCCACTAATGGTTTCTCAGACCAGAAACTACTGGGCAGAGGCAGTCATGGTTGCGTCTACAAAGGCGTCCTCCGCAGTGGCCGTCTTGTCGCCGTCAAGAAACCCTCTCGTAGCTCCTCTTTTCGACTCACCGCCTCTTCGACCGACACCACCAACGAAGTCGACAACGAGATTGATATTCTCTCCAGGATTCAGAATCCTCGCCTTGTAAATTTACTTGGGTTCTCCACTGGTTCAAGCTCAAGCGACCGCCTGTTGGTCGTTGAGTTCATGAGCAATGGAACCCTTTACGATATTCTTCACTCCAGTCCTCGACCTCCTAATTGGGGTCGAAGAATCCGACTTGCCCTTCAGACTGCTAAGGCCGTCCATACCCTTCATTCGTCGAATCCTCCGGTGATTCATAGAGATATTAAGTCTGCAAATGTGTTGATTGATAGGAATTTCAATGCCCGGTTAGGCGATTTCGGGTTGGCTCTTCAATGTCATGTCGATGATTTCCGGCTTCGATCGACGCCTCCAGCGGGGACAATTGGGTATCTTGATCCTGGATACATTACGCCGGATAATCTTAGTACCAAGACCGATGTATTCAGTTTTGGCATTCTTCTTTTGGAAATTATCAGTGGTAGGAAGGCGATCGATGTCGGGCATTCCCCTCCTTCAATTGTGGATTGGGCGATTCCTCTTATACGAAAAGGGAAGCTCCTCACTATTTACGATCCAAGAATTCCACCCCTGAAAGACCCGTCTGTGAGGAAGCAATTGGCGGTGCTTGCCGCGAAGTGTGTAAGGTCTTGCAGGGAACGAAGGCCGTCAATGAAGGATGTAATTGAGTCCCTTGGTGTTTTGAGTAAATCAGTACCCGTCCACTCCTGGAACGGTTTATCAGTTAATAACCCATGTATGGTGGTAGAGGCAATGGGACGCCCGGTTGAATCTAGAAATACCCCTGTGAATTCAAGGCCAAGGCGCCGGGAAGGAGGAAGTGGGGAGATGGTGGATGATAATGTTGGTAGGCCAATGAGAAATTCAAGGAGGGTGTACTCTGATTTGGGTTTGGGTGCCAGGAATAATTTGATGGACCTCATGGCAGAGATGGATGGGGAGTCCAATTTTCTCGGAGAGGCCAATGGGGTTGAGTCTGTGTCCTCGGCAATCCGGCATTCTGGTTTAAGAGTTGGAAGTAGAAGATTTGTTGGCAGGGGAAGAACTCAGTCTCTAGCTGACAATTCTGATAGGGATGGCATCTTTCAATTGAGGAGAAATCAATCTTTTCGAGGACATTTCCGGAAGTTCTCAAGGCCATATGGCCTTGGTCATTCGGATGGCGGGGCATTTTGCATTCAAGCAGCAGATCCTGTCTAG 1515 0.4865 MGYLSCRAESAIATTTTTTTTTKAKKSKNKEELEKPIKVQQFQYRDLEAATNGFSDQKLLGRGSHGCVYKGVLRSGRLVAVKKPSRSSSFRLTASSTDTTNEVDNEIDILSRIQNPRLVNLLGFSTGSSSSDRLLVVEFMSNGTLYDILHSSPRPPNWGRRIRLALQTAKAVHTLHSSNPPVIHRDIKSANVLIDRNFNARLGDFGLALQCHVDDFRLRSTPPAGTIGYLDPGYITPDNLSTKTDVFSFGILLLEIISGRKAIDVGHSPPSIVDWAIPLIRKGKLLTIYDPRIPPLKDPSVRKQLAVLAAKCVRSCRERRPSMKDVIESLGVLSKSVPVHSWNGLSVNNPCMVVEAMGRPVESRNTPVNSRPRRREGGSGEMVDDNVGRPMRNSRRVYSDLGLGARNNLMDLMAEMDGESNFLGEANGVESVSSAIRHSGLRVGSRRFVGRGRTQSLADNSDRDGIFQLRRNQSFRGHFRKFSRPYGLGHSDGGAFCIQAADPV* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00611 504 ProSiteProfiles Protein kinase domain profile. 54 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g00611 504 PANTHER OS01G0253100 PROTEIN 24 334 - -
Eupl05g00611 504 FunFam Serine/threonine-protein kinase-like protein 140 343 - -
Eupl05g00611 504 SMART serkin_6 54 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g00611 504 Pfam Protein kinase domain 55 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g00611 504 MobiDBLite consensus disorder prediction 360 392 - -
Eupl05g00611 504 MobiDBLite consensus disorder prediction 368 382 - -
Eupl05g00611 504 Gene3D Phosphorylase Kinase; domain 1 12 139 - -
Eupl05g00611 504 SUPERFAMILY Protein kinase-like (PK-like) 33 330 IPR011009 -
Eupl05g00611 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 182 194 IPR008271 GO:0004672|GO:0006468
Eupl05g00611 504 Gene3D Transferase(Phosphotransferase) domain 1 140 341 - -
Eupl05g00611 504 ProSitePatterns Protein kinases ATP-binding region signature. 60 83 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00611 Eupl-Chr5 24529794 24532043 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00611 6 330 Receptor kinase-like Gene Family AT3G59420 41.212 4.62e-75 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Eupl05g00611 Pkinase 1.6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00611 - - nnu:104606293 689.878