Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00601 ATGCAAAACCTATTCCTCCTGCTTGAGAACATGACTCCATGCAAAAAAGAGTCGACTCCCTTAAGAGCAAGGAATTCTTTGCCAAATGGTGCTTTGATGTCGAGTTCCATCATCTCACCCCTAGGCGCTGTGTCAATGCGGATCCCTCTTCAATCTGGATATAGGATACTTAACAGCGACGTCAACTCCTTAAGACGCTCTTGTGCAGGCTTTCTTGCAGCAAGAAGTCATGATGGACAAGGAGATGGTCTTCACTATTTCTGGCAAGGGAAGATGGGGGCAAAAGGGGGGAAGAAGATGCGGGCAACGAGCTCTAACAAATTCGGAACGGATGCGTTGAATGAAGGGGACAGTCACAGCAATGGAGTAGTTCAAGTCCTTCCTCAGCAAGGATTGAAAGACAAGGATCGGATAACAGGGTTGCAATATGGAGGCTATGTTACTGTCAACCAAAAAGCTGGAAGTGCCCTTTTCTACTATTTTGTGGAAGCTGAGGGTCCCAAGGATTCAATGCCTCTCCTCCTTTGGTTAAATGGAGTTCGGCTGTGCTGGATTTGCTCCAGGATAAGTAAATCACGTGAGATCGGCAATCCTTCTATGGAGGACGCACTTGATGGAATCAGCGAGTACGAATTCCTGGCATCGCACTCTATCATCACCGAGAATACGGTTGATGGAATCCGCAAGGCCTGTGATTTCTCTAATAAAATTTATTGGAATGACCTCCCCTGTATGATCAGCACCATTCCTGCGCACGCTCAAAGCGGAAACATTAATCCCTACAATATATTAGAGCCGGTGTGCTATGATCGATTTAACAACCTCACACTCAAAGATTATTCGCTCCTGAAGTTCGATACATGCAGCGATTATTATGTATACGCGTATTTGAATGATCTCGGTGTCCAAGAAGCCATACACGCCGAAGCGACAGAATATTTGCTTTGCCAAGACATGACCATGGATTGGACGGATCAATCTCGAACCACTTTACCAAACCTTCAAGGGATTATGGCCCAAGGAGTCCCTGTTTGGGTATACAGCGGCGATTTGGACTCGGTAGTTCCCTTTGTTGGCACTACAAAAGCATTGAAAAAGCTTAATCTTACGGAGCAAACTGAATGGAGACCTTGGTATAATGGAAAACAGGTTGCTGGATACACTGTGGCCTATAACGCCAGAAGCCATGCCGGGCAAGGAGATGGCCTTCCCTATTTCTGGCAAGGGAAGATGGAGTCAAAAACGAAGAAGGTTGGACCAAAAGTCGGGAAGGTGATGGGATTAACGAGCTCTAACAACTTCGGAACGGATGCGTTGAATGAAGGGGAGGACAGTCACAGCAATGGAGTAGTTCAAGTCCTGCCTCAGCAAGGATTGAAAGACAAGGATCGGATAACAGGGTTGCCGGGGCAACCCCGTAAAGCAATTTTTGAGCAATATGGAGGCTATGTTACGGTCAACCAAAAAGCTGGACGAGCCCTTTTCTACTACTTTGTGGAAGCTGAGGGTCCCAAGGATTCAATGCCTCTCCTCCTTTGGTTTAATGGAGGTGTTACATCTTACTCAAATATGTTATTGATGTTGCAGATCGGCAATCCTTCCATGGATGATGCACTTGATGGAATCGGCGAATATGAATTCCTGGCATCGCACTCTATCATCACCGAGGATATGGTTGATGAAATGCGCAAATCCTGTGATTTCTCAGATGTATTTTATAAGAATAAGACATGTCTATCCAGCACCGTGAAGGCGCATGATCAAAGCGGACACATTAATCCCTACAGTATATTAGACCCGGTGTGCTACAGTACAAGTGTCACCGCCACACCCAAGGAAGCTACGCTCCTGAAGTTCGATACATGCAGCGAGTATTATGTAGACGCGTATTTGAATGATCCCGACGTACAAGAAGCTATACATGCCACGAAGACAGATTATTTGAGTTGCCAAGACATGGACTGGAAGGATCAATCTCGAACTGTTTTACAATTCCTTCAAGGGATTATGGCCCAAGGAGTCCCTGTTTGGGTATACAGCGGTGATGAGGACTCGGTAGTTCCCTTCGTTAGCACCACGAAAGCATTGAAAAAGCTTAATCTTACGGAACAGGCTTCATGGAGACCTTGGTATAATGGCAAACAGGTTGCTGGATACACTGTGGTCTATAATGGCGGCTTAACATACGCCACAGTGAAAGGAGCAGGTCATGAGGTCCCAAGTTACCAGCCCGAAGCATCACTTATACTTGTCTCGTCTTTCCTTAAAGGAAAGCCACTCCCAGCATCATCTCTTCGGTCAATTACAGCTAAACCTGGTGATGGTGGTTTTGGGTTTCAATTCAATGAAACTCATTTCAATGAAACAGGGTCTAATAGCAGTAATGGTCGATAA 2394 0.4578 MQNLFLLLENMTPCKKESTPLRARNSLPNGALMSSSIISPLGAVSMRIPLQSGYRILNSDVNSLRRSCAGFLAARSHDGQGDGLHYFWQGKMGAKGGKKMRATSSNKFGTDALNEGDSHSNGVVQVLPQQGLKDKDRITGLQYGGYVTVNQKAGSALFYYFVEAEGPKDSMPLLLWLNGVRLCWICSRISKSREIGNPSMEDALDGISEYEFLASHSIITENTVDGIRKACDFSNKIYWNDLPCMISTIPAHAQSGNINPYNILEPVCYDRFNNLTLKDYSLLKFDTCSDYYVYAYLNDLGVQEAIHAEATEYLLCQDMTMDWTDQSRTTLPNLQGIMAQGVPVWVYSGDLDSVVPFVGTTKALKKLNLTEQTEWRPWYNGKQVAGYTVAYNARSHAGQGDGLPYFWQGKMESKTKKVGPKVGKVMGLTSSNNFGTDALNEGEDSHSNGVVQVLPQQGLKDKDRITGLPGQPRKAIFEQYGGYVTVNQKAGRALFYYFVEAEGPKDSMPLLLWFNGGVTSYSNMLLMLQIGNPSMDDALDGIGEYEFLASHSIITEDMVDEMRKSCDFSDVFYKNKTCLSSTVKAHDQSGHINPYSILDPVCYSTSVTATPKEATLLKFDTCSEYYVDAYLNDPDVQEAIHATKTDYLSCQDMDWKDQSRTVLQFLQGIMAQGVPVWVYSGDEDSVVPFVSTTKALKKLNLTEQASWRPWYNGKQVAGYTVVYNGGLTYATVKGAGHEVPSYQPEASLILVSSFLKGKPLPASSLRSITAKPGDGGFGFQFNETHFNETGSNSSNGR* 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00601 797 Gene3D - 622 655 - -
Eupl05g00601 797 Gene3D - 288 319 - -
Eupl05g00601 797 Gene3D - 330 400 - -
Eupl05g00601 797 Gene3D - 662 757 - -
Eupl05g00601 797 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 194 391 IPR001563 GO:0004185|GO:0006508
Eupl05g00601 797 Gene3D alpha/beta hydrolase 458 528 IPR029058 -
Eupl05g00601 797 Gene3D alpha/beta hydrolase 529 612 IPR029058 -
Eupl05g00601 797 Gene3D alpha/beta hydrolase 191 278 IPR029058 -
Eupl05g00601 797 SUPERFAMILY alpha/beta-Hydrolases 465 761 IPR029058 -
Eupl05g00601 797 SUPERFAMILY alpha/beta-Hydrolases 194 395 IPR029058 -
Eupl05g00601 797 ProSitePatterns Serine carboxypeptidases, histidine active site. 727 744 IPR033124 GO:0004185
Eupl05g00601 797 Pfam Serine carboxypeptidase 193 392 IPR001563 GO:0004185|GO:0006508
Eupl05g00601 797 Pfam Serine carboxypeptidase 528 757 IPR001563 GO:0004185|GO:0006508
Eupl05g00601 797 Pfam Serine carboxypeptidase 140 179 IPR001563 GO:0004185|GO:0006508
Eupl05g00601 797 Pfam Serine carboxypeptidase 469 517 IPR001563 GO:0004185|GO:0006508
Eupl05g00601 797 Gene3D alpha/beta hydrolase 121 190 IPR029058 -
Eupl05g00601 797 SUPERFAMILY alpha/beta-Hydrolases 141 179 IPR029058 -
Eupl05g00601 797 FunFam Carboxypeptidase 662 757 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00601 Eupl-Chr5 24360605 24377188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00601 630 760 Calmodulin-binding Proteins AT2G22960 33.333 5.72e-19 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00601 K16297 - msin:131225845 223.787