Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00590 ATGGGTACTTCTCGGAGACAGTTGAAAGCCATGCTTCGGAAGAACTGGCTTCTGAAGATTCGCCATCCTTTTGTTACTGGTGCTGAGATTTTGCTTCCGACTATAGTCATGCTGATGCTAATAGGTGTGAGGACTGGGGTTGATACGACAATTCACCAAGTGCAACCGTACATTCGGAAAGGATTGTTCGTGGAAGTGGGCAAAAGTGATATTTCTCCCAGTTTTCAGCAGACTCTGGAATCCTTGTTGGCCAAGGGTGAGCATCTGGCCTTTGCACCAGATACAGAAGAGACGAGGAGGATGATCAACTTAATATCTCTAAGGTTTCCTCTTCTGAAGGTGGTTGCAAGAGTTTACAAGGATGAACTAGAGCTGGAAACTTACATACGTTCAGATCTTTATGGTGCTAGTAATCAAATCAAGAATTCTTCAAATCCCAAAATCAAAGGAGCAATAATATTTCATGAGCAAGGTCCTCAATTATTTGACTATAGTATACGTCTCAACCACTCGTGGGCTTTCTCAGGATTTCCTGATGTCAAAACCATCATGGACACAAATGGCCCTTATCTAAATGACTTGGAATTGGGTGTTGATACTGTGTCAACACTGCAATATGGCTTCAGCGGATTTTTGACTTTGCAGCAGGTGTTGGATGCATTCATAATATTTGCCGCTCAACAAAATGAAACTAACATTGTCAATGAAGAAAGCAAATTGCCATCTTTCCACTCATTTGGAACTGCCTCTCTTGTCAATCTACCCTGGTTGCAGTTTAGTCCTTCAAACATAAGGATTGCTCCATTTCCGACTCGTGCGTACACTGACGATGAGTTTCAGTCCATCATCAAGAGAGTCATGGGAGTACTGTATCTTCTGGGATTTCTCTACCCAATATCTCGTCTGATCAGCTATTCCGTGTTTGAGAAGGAACAGAAGATAAAAGAAGGCCTTTACATGATGGGCTTGAAAGACGAGATATTCTATCTCTCTTGGTTTATTACATACTCTTTACAGTTGGCAATTTCTTCTGGAATTATTACAGCCTGCACAATGGGGAGCCTTTTCAAGTATAGTGATAAATCAGTGGTGTTCATGTATTTCTTTTTGTTTGGACTCAGTGCAATCATGCTTTCCTTTTTGATCTCGACGTTCTTTACACGAGCAAAGACAGCTGTGGCAGTTGGCACCCTTTCTTTTCTTGGAGCTTTCTTCCCTTATTACACAGTCAATGATTCATCTGTCCCTATGATATTAAAGGTCATGGCTTCTTTGCTTTCACCTACGGCGTTTGCTCTTGGGACGATTAACTTCGCTGATTACGAGCGTGCTCATGTTGGAGTCCGGTGGAGCAACATATGGCGGGAATCATCTGGAGTAAATTTTTTGGTCTGTCTACTGATGATGTTGCTTGACACACTATTGTATTGTGCGATTGGTCTGTACCTTGATAAGGTCCTTCCTAGGGAGAATGGAGTGCGGCTTCCATGGAACTTTTTATTTAACAAGTGCTTCTGGGGAAAGAAATGCACGTCCCAAAGTGGTATAGAAGTCCAAATTAATGATATGCTTTGCAAAAACAAGGCCACCTTTGCTGGTAAAGCTATTTCTGAACCAGCTGTAGAAGCGATAAGCTTGGATATGAAACAACAAGAGCTCGATGGAAGATGTATCCAGATTAGGAATTTGCACAAGGTGTACACTACAAAAAAGCGGAAGTGTTGTGCTGTGAACTCATTACAACTCACTTTATATGAAAATCAAATTCTTGCTCTTCTAGGGCACAATGGAGCTGGTAAAAGCACGACAATTTCTATGCTTGTTGGCCTCCTTTCGCCTACTTCTGGGGATGCTTTGGTGTGTGGAAAAAATATCAGAACTGACATGGATGAGATACGGAAGGGATTGGGTGTGTGCCCACAAAATGATATTCTGTTTCCGGAATTAACTGTCAAGGAACATTTGGAAATATTTGCCATTTTGAAGGGTGTTAAGGAAGACTCCTTGGAGAGAATTGTGAATGAAATGATTGATGAAGTGGGTTTGGCAGATAAAGCTAACACAGTTGTTAGGGCTCTCTCTGGTGGCATGAAGAGGAAGTTGTCACTTGGAATTGCACTCATAGGAAATAGTAAGGTTATCATTCTTGATGAACCTACTAGTGGAATGGACCCATATTCAATGCGTTCAACGTGGCAATTAATCAAGAAGATCAAGAAGGGTAGGATAATATTATTGACAACACACTCCATGGACGAGGCTGATGTGCTAGGAGATCGGATAGCTATCATGGCAAATGGTTCTTTGAGATGCTGCGGAAGTTCTCTCTTCTTGAAGCACCAGTATGGTGTTGGTTATACTCTTACTTTGGTGAAGACTGCACCTAGTGCTTCTGTTGCTGCAGACATTGTTCATCGTCATGTTCCATCTGCAACTCGCTTGAGTGACGTTGGTACAGAGATTTCCTTCAGACTTCCCCTATCATCCTCGTCTTCTTTTGAGAGTATGTTCCGGGAAATTGAAAGCTGCATGAGAAGACCAGACACTTCCTCAGAAGCAAGTGTTAACAAGGAAGAATGCTGTCTCGGTATTGAGGGTTATGGTATCTCTGTCACAACACTGGAGGAGGTGTTCCTAAGAGTTGCAGGATGTGACTTTGACGAAACTGAATACATTGAACAGAATAAAGATTTTGTTTTAACTGATTCTGTGGTTTCTGAATCCTCACATTGTCCTCCAATGAAAGTCTCATATTCTAAACTACATTGTGGATATTATATGAAGTTTCTTGGGATGATATTTGCCACAATGGGGAGGGCTTGTAGTTTGATTTTCGGTATGGTTTTCAGTGTCATAAGTTTCTTAAGCATACAGTGCTGTAGCTCTTGCATCCTAAGGTCTACATTTTGGGAACATTTTAAAGCTCTCCTTATAAAGAGGGCAATATCTGCTCGAAGAGACCGAAGAACAATCGTTTTCCAGCTTCTTATCCCTGCTGTCTTCTTGCTTTTTGGTCTCTCTTTCTCGAGCTTAAGCCACATCCTGATCAGCAGTCTGTGA 3060 0.4173 MGTSRRQLKAMLRKNWLLKIRHPFVTGAEILLPTIVMLMLIGVRTGVDTTIHQVQPYIRKGLFVEVGKSDISPSFQQTLESLLAKGEHLAFAPDTEETRRMINLISLRFPLLKVVARVYKDELELETYIRSDLYGASNQIKNSSNPKIKGAIIFHEQGPQLFDYSIRLNHSWAFSGFPDVKTIMDTNGPYLNDLELGVDTVSTLQYGFSGFLTLQQVLDAFIIFAAQQNETNIVNEESKLPSFHSFGTASLVNLPWLQFSPSNIRIAPFPTRAYTDDEFQSIIKRVMGVLYLLGFLYPISRLISYSVFEKEQKIKEGLYMMGLKDEIFYLSWFITYSLQLAISSGIITACTMGSLFKYSDKSVVFMYFFLFGLSAIMLSFLISTFFTRAKTAVAVGTLSFLGAFFPYYTVNDSSVPMILKVMASLLSPTAFALGTINFADYERAHVGVRWSNIWRESSGVNFLVCLLMMLLDTLLYCAIGLYLDKVLPRENGVRLPWNFLFNKCFWGKKCTSQSGIEVQINDMLCKNKATFAGKAISEPAVEAISLDMKQQELDGRCIQIRNLHKVYTTKKRKCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLLSPTSGDALVCGKNIRTDMDEIRKGLGVCPQNDILFPELTVKEHLEIFAILKGVKEDSLERIVNEMIDEVGLADKANTVVRALSGGMKRKLSLGIALIGNSKVIILDEPTSGMDPYSMRSTWQLIKKIKKGRIILLTTHSMDEADVLGDRIAIMANGSLRCCGSSLFLKHQYGVGYTLTLVKTAPSASVAADIVHRHVPSATRLSDVGTEISFRLPLSSSSSFESMFREIESCMRRPDTSSEASVNKEECCLGIEGYGISVTTLEEVFLRVAGCDFDETEYIEQNKDFVLTDSVVSESSHCPPMKVSYSKLHCGYYMKFLGMIFATMGRACSLIFGMVFSVISFLSIQCCSSCILRSTFWEHFKALLIKRAISARRDRRTIVFQLLIPAVFLLFGLSFSSLSHILISSL* 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00590 1019 ProSitePatterns ABC transporters family signature. 693 707 IPR017871 GO:0005524|GO:0016887
Eupl05g00590 1019 SMART AAA_5 586 768 IPR003593 GO:0016887
Eupl05g00590 1019 Gene3D - 545 794 IPR027417 -
Eupl05g00590 1019 Pfam ABC-2 family transporter protein 211 481 IPR013525 GO:0016020|GO:0140359
Eupl05g00590 1019 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 555 774 IPR027417 -
Eupl05g00590 1019 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 550 884 IPR026082 GO:0016020|GO:0055085|GO:0140359
Eupl05g00590 1019 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 558 791 IPR003439 GO:0005524
Eupl05g00590 1019 Pfam ABC transporter 578 721 IPR003439 GO:0005524
Eupl05g00590 1019 CDD ABC_subfamily_A 558 779 - -
Eupl05g00590 1019 FunFam ATP-binding cassette sub-family A member 12 550 796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00590 Eupl-Chr5 23993419 24105440 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00590 558 831 Calmodulin-binding Proteins AT2G36910 26.214 5.89e-17 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00590 K05643 - nnu:104613465 1567.36