Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00589 ATGAATGAATTTCTAATAACTAGCTTGAATGAGTCATACCAGTCGAGGTATGGATCTATTGTAATGGATGAGCAGAACGATGATGGAAGTTTAGGATACACTGTACTTCACAACAGTACTTGTCAACATGCGGCTCCAACCTTTATCAATTTGATGAATAGTGCAATTCTGAGGCTTGCAACGCATAATGAAAATATGACGATTCAAACACGTAATTACCCACTGCCAATGACAAGAACTCAGCACTCACAGCATCATGATCTGGATGCATTCTCTGCTGCAATTATTGTTAATATTGCCTTCTCCTTCATCCCCGCCTCATTTGCAGTTTCTATTGTTAAGGAACGTGAAGTAAAAGCAAAGCACCAACAAATAATCAGTGGGGTCTCTATACTTTCATATTGGATTTCCACATACATATGGGACTTCATCAGCTTCTTATTTCCTTCATTTTTTGCAATAATTCTCTTTTACATATTTGGTCTGGATCAGTTTGTAGGAAGTGATTGTTTCTTGCCTACGATTTTCATGTTTTTGGAATATGGATTAGCAAGTGCAGCATCAACGTATTGCCTCACGTTCTTCTTTTCTGAACACTCCCTAGCACAGAATGTGGTTCTCCTGGTACACTTGTTCACTGGACTGATTCTTATGGTTATCTCATTTATTATGGGGCTTATAGAAACAACTAAGACTGCAAATTTGTTTCTTAAGAACTTCTTTAGATTATCACCAGGATTTTGCTTTGCGGATGGACTTGCTTCACTAGCTCTTCGACGGCAAGAAATGAAACTTGGATCCAGCAATGGAATTCTTGACTGGAACGTGACTGGTGCCTCCATCTGTTATTTAGGTGTTGAGAGCATCATTTACTTCCTTCTCACAATTGGGCTTGAACTCTTACCTTCTCACAAATTAACATCAGTTACAATCAAGGAGTGGTGGGGGAGTTTTAGGCAGCTCCGACGTGTCAATTCCGAGAGTTACTTGGAACCTCTTCTGAAATCATCCTCTGAAACTCTTGCTCTTGATGTTGACAACGACATAGATGTGCAGGCAGAAAGACACAGGGTACTCTCAGGTTCTGCTAATAATGCCATAATCTACCTGCGTAATCTCCGGAAGGTGTATCCCGGAGGAAGAAATCATGGCTCAAAAGTTGCAGTTCATTCATTGAGTTTCTCTGTTCAAGAAGGAGAATGTTTTGGGTTTCTAGGAACAAATGGGGCAGGGAAGACTACAACTCTGTCAATGCTATCTGGAGAAGAATTCCCAACTGATGGAACTGCATATATCTTTGGCAACGATATACGTTCACACCCCAAGGCTGCTCGTCGCCATATTGGTTATTGCCCACAATTTGATGCTCTGCTAGAATTTCTAACTGTCCAAGAGCATCTTGAACTTTATGCAAGAATAAAAGGGGTCCCAGAAAACAGGATGAAAGATGTTGTTGAGGAAAAGTTGGTGGAATTCGATTTGTGGAAGTATGCTAATAAACCGTCATATTCTCTTAGTGGAGGGAATAAGCGCAAATTGTCTGTTGCAATTGCAATGATTGGAGATCCTCCCATAGTTATTCTTGATGAGCCATCTACAGGTATGGATCCTATTGCCAAACGATTCATGTGGGACGTTATATCCCGCCTATCAACCAGACAGGGAAAGACAGCAGTTATTCTAACTACCCATAGTATGAATGAAGCTCAAGCACTATGCACACGGATTGGAATAATGGTTGGAGGCCGGCTGAGATGCATTGGAAGTCCTCAGCATCTGAAAACTCGTTTTGGAAATCATCTTGAACTAGAGGTAAAACCTGTTGAAGTCAGCTCTACAGAGTTGGATAAACTGTGTAGAAGAATTCAAGAAAGGCTCTTTGACATGCCATGTCATCCAAGGAGCATACTCAGTGACCTTGAAGTTTGCATTGGAGGAAGTGACTCTATAACAGCAGAAAATGTGTCAGTGGCAGAGATTAGTTTGTCAGAGGAAATGATCATTGTAATTGGGCGCTGGTTTGGCAATGAAGAAAGAATAAGGACACTCGTATCTTCTACACCTGTTACGGATGGTGTGTTTGGAGAGCAATTATCAGAGCAGCTAATTCGTGATGGTGGTATTCCATTGCCAATATTTTCTGAGTGGTGGTTGGCCAAAGAAAAGTTCTCCATAATTGATTCATTTATCCTATCTTCATTTCCTGGAGCAACGCTTCAAGGTTGCAATGGGTTGAGTGTTAAGTATCAGCTTCCATATAGAGAAGACACCTCACTTGCTGATATTTTTGGACACCTAGAGAGAAACAGGAGCCAACTAGGAGTAGCAGAATACAGCATCAGTCAATCGACACTGGAGACCATTTTTAATCATTTTGCTGCAAACCCATAA 2391 0.4095 MNEFLITSLNESYQSRYGSIVMDEQNDDGSLGYTVLHNSTCQHAAPTFINLMNSAILRLATHNENMTIQTRNYPLPMTRTQHSQHHDLDAFSAAIIVNIAFSFIPASFAVSIVKEREVKAKHQQIISGVSILSYWISTYIWDFISFLFPSFFAIILFYIFGLDQFVGSDCFLPTIFMFLEYGLASAASTYCLTFFFSEHSLAQNVVLLVHLFTGLILMVISFIMGLIETTKTANLFLKNFFRLSPGFCFADGLASLALRRQEMKLGSSNGILDWNVTGASICYLGVESIIYFLLTIGLELLPSHKLTSVTIKEWWGSFRQLRRVNSESYLEPLLKSSSETLALDVDNDIDVQAERHRVLSGSANNAIIYLRNLRKVYPGGRNHGSKVAVHSLSFSVQEGECFGFLGTNGAGKTTTLSMLSGEEFPTDGTAYIFGNDIRSHPKAARRHIGYCPQFDALLEFLTVQEHLELYARIKGVPENRMKDVVEEKLVEFDLWKYANKPSYSLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWDVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGRLRCIGSPQHLKTRFGNHLELEVKPVEVSSTELDKLCRRIQERLFDMPCHPRSILSDLEVCIGGSDSITAENVSVAEISLSEEMIIVIGRWFGNEERIRTLVSSTPVTDGVFGEQLSEQLIRDGGIPLPIFSEWWLAKEKFSIIDSFILSSFPGATLQGCNGLSVKYQLPYREDTSLADIFGHLERNRSQLGVAEYSISQSTLETIFNHFAANP* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00589 796 CDD ABC_subfamily_A 368 594 - -
Eupl05g00589 796 FunFam ABC transporter A family member 1 357 611 - -
Eupl05g00589 796 Pfam ABC transporter 390 532 IPR003439 GO:0005524
Eupl05g00589 796 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 16 301 IPR026082 GO:0016020|GO:0055085|GO:0140359
Eupl05g00589 796 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 368 606 IPR003439 GO:0005524
Eupl05g00589 796 Pfam ABC-2 family transporter protein 17 296 IPR013525 GO:0016020|GO:0140359
Eupl05g00589 796 SMART AAA_5 398 585 IPR003593 GO:0016887
Eupl05g00589 796 ProSitePatterns ABC transporters family signature. 505 519 IPR017871 GO:0005524|GO:0016887
Eupl05g00589 796 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 363 600 IPR027417 -
Eupl05g00589 796 Gene3D - 355 626 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00589 Eupl-Chr5 23935189 23993008 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00589 392 593 Calmodulin-binding Proteins AT2G36910 23.982 1.33e-10 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00589 K05643 - msin:131231407 1360.9